| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2000859 = | 104 (2.010) | 6 (0.120) | 4/96 | NT | 6.9% | coding (424/1860 nt) | gss | fused glutathionylspermidine amidase and glutathionylspermidine synthetase |
| ? | minE | 2000891 = | 65 (1.330) | coding (392/1860 nt) | gss | fused glutathionylspermidine amidase and glutathionylspermidine synthetase | |||||
GTGAATTTAAAGACACTGGCCATGTCGCCATCATTACCCAATTGCATGGCAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2000912‑2000859‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaTGGCCAGTGTCTTTAAATTCACCGCCTTTATCCCAGATAAGAAGCGCACCCGCGACCGGCGCACGCGGC > minE/2000891‑2000959 GTGAATTTAAAGACACTGGCCATGTCGCCATCATTACCCAATTGCATGGCAACA < 1:380287/54‑1GTGAATTTAAAGACACTGGCCATGTCGCCATCATTACCCAATTGCATGGCAACA < 1:3871835/54‑1 TTAAAGACACTGGCCATGTCGCCATCATTACCCAATTGCATGGCAAC < 1:1962227/47‑1 TAAAGACACTGGCCATGTCGCCATCATTACCCAATTGCATGGCAACA > 1:641752/1‑47 TCGCCATCATTACCCAATTGCATGGCAACATGGCCAGTGTCTTTAAATTCACCGCCT < 1:1507597/57‑1 CCATCATTACCCAATTGCATGGCAACATGGCCAGTGTCTTTAAATTC > 1:2630601/1‑47 CCATCATTACCCAATTGCATGGCAACATGGCCAGTGTCTTTAAATTC > 1:552948/1‑47 CCATCATTACCCAATTGCATGGCAACATGGCCAGTGTCTTTAAATTC > 1:776961/1‑47 TCATTACCCAATTGCATGGCAACATGGCCAGTGTCTTTAAATTCACCGCCT > 1:440478/1‑51 AATTGCATGGCGACATGGCCAGTGTCTTTAAATTCACCGCCTTTATCCCAGATAAGAAGCGCACCCGCGAC < 1:3515913/71‑1 ACATGGCCAGTGTCTTTAAATTCACCGCCTTTATCCCAGATAAGAAGCGCACCCGCGACCG < 1:3228507/61‑1 CATGGCCAGTGTCTTTAAATTCACCGCCTTTATCCCAGATAAGAAGCGCACCCGCGACCGGCGCACGCGGC < 1:2939577/71‑1 CATGGCCAGTGTCTTTAAATTCACCGCCTTTATCCCAGATAAGAAGCGCACCCGCGACCGGCGCACGCGGC < 1:3569927/71‑1 CATGGCCAGTGTCTTTAAATTCACCGCCTTTATCCCAGATAAGAAGCGCACCCGCGACCGGCGCACGCGGC < 1:3915471/71‑1 GTGAATTTAAAGACACTGGCCATGTCGCCATCATTACCCAATTGCATGGCAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2000912‑2000859‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaTGGCCAGTGTCTTTAAATTCACCGCCTTTATCCCAGATAAGAAGCGCACCCGCGACCGGCGCACGCGGC > minE/2000891‑2000959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |