| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2083973 | 78 (1.510) | 5 (0.110) | 3/92 | NT | 6.7% | coding (333/384 nt) | yqjB | conserved hypothetical protein |
| ? | minE | = 2083985 | 69 (1.480) | coding (345/384 nt) | yqjB | conserved hypothetical protein | |||||
CCGCCGCAAAAGCGGTCCTCGACAGAACATTGCCCCATGGCTACATCATTGCGCAGCAGGACAATAACAGTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2083900‑2083973‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcagCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTCGAGG < minE/2083985‑2083916 CCGCCGCAAAAGCGGTCCTCGACAGAACATTGCCCCATGGCTACATCATTGCGCAGCAGGACAATAACAGT > 1:1001744/1‑71 GACAGAACATTGCCCCATGGCTACATCATTGCGCAGCAGGACAATAACAGTCAGCCACTGCATAGCCTGA < 1:703512/70‑1 GACAGAACATTGCCCCATGGCTACATCATTGCGCAGCAGGACAATAACAGTCAGCCACTGCATAGCCTGA < 1:3378145/70‑1 GACAGAACATTGCCCCATGGCTACATCATTGCGCAGCAGGACAATAACAGTCAGCCACTGCATAGCCTGA < 1:2603671/70‑1 CAGAACATTGCCCCATGGCTACATCATTGCGCAGCAGGACAATAACAGTCAGCCACTGCATAGCCTGACT > 1:2999084/1‑70 CCCCATGGCTACATCATTGCGCAGCAGGACAATAACAGT < 1:621756/39‑1 GCGCAGCAGGACAATAACAGTCAGCCACTGCATAGCCT < 1:2066179/38‑1 GTCAGCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTC < 1:130691/71‑1 GTCAGCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTC < 1:3748922/71‑1 GTCAGCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTC < 1:3159933/71‑1 GTCAGCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTC > 1:2198380/1‑71 GTCAGCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTC < 1:1790939/71‑1 GTCAGCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTC < 1:1616691/71‑1 AGCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTCGAG > 1:2442300/1‑71 AGCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTCGAG > 1:2745071/1‑71 AGCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTCGAG > 1:2422583/1‑71 AGCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTCGAG < 1:1805800/71‑1 AGCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTCGAG < 1:3648672/71‑1 GCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTCGAGG < 1:1331315/71‑1 CCGCCGCAAAAGCGGTCCTCGACAGAACATTGCCCCATGGCTACATCATTGCGCAGCAGGACAATAACAGTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2083900‑2083973‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcagCCACTGCATAGCCTGACTGTTATTGTCCTGCTGCGCAATGATGTAGCCATGGGGCAATGTTCTGTCGAGG < minE/2083985‑2083916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |