New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | 2140433 = | 60 (1.160) | 3 (0.060) | 3/94 | NT | 6.0% | coding (675/2673 nt) | infB | fused protein chain initiation factor 2, IF2 |
? | minE | 2140452 = | 38 (0.800) | coding (656/2673 nt) | infB | fused protein chain initiation factor 2, IF2 |
GCGTTGCTGAAGAAGCACGTCGTATGGCGGAAGAAAACAAATGGACTGATAACGCGGAACCGACTGAAGATTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2140506‑2140433 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccGCGTTATCAGTCCATTTGTTTTCTTCCGCCATACGACGTGCTTCTT > minE/2140452‑2140497 GCGTTGCTGAAGAAGCACGTCGTATGGCGGAAGAAAACAAATGGACTGATAACGCGGAACCGACTGAAGAT < 1:11576/71‑1 GCGTTGCTGAAGAAGCACGTCGTATGGCGGAAGAAAACAAATGGACTGATAACGCGGAACCGACTGAAGAT > 1:309662/1‑71 TGCTGAAGAAGCACGTCGTATGGCGGAAGAAAACAAATGGACTGATAACGCGGAACCGACTGAAGATTC > 1:2013912/1‑69 TGCTGAAGAAGCACGTCGTATGGCGGAAGAAAACAAATGGACTGATAACGCGGAACCGACTGAAGATTC > 1:3801029/1‑69 CGCGGAACCGACTGAAGATTCCGCGTTATCAGTCCATTTGTTTTCTTCCGCCATACGACGTGCTTC < 1:950287/66‑1 CGGAACCGACTGAAGATTCCGCGTTATCAGTCCATTTGTTTTCTTCCGCCATACGACGTGCTTCTT > 1:2825330/1‑66 GAACCGACTGAAGATTCCGCGTTATCAGTCCATTTGTTTTCTTCCGCCATACGAC > 1:1857840/1‑55 GCGTTGCTGAAGAAGCACGTCGTATGGCGGAAGAAAACAAATGGACTGATAACGCGGAACCGACTGAAGATTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2140506‑2140433 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccGCGTTATCAGTCCATTTGTTTTCTTCCGCCATACGACGTGCTTCTT > minE/2140452‑2140497 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |