| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2270768 = | NA (NA) | 5 (0.110) | 3/90 | NT | 44.7% | intergenic (‑18/+75) | rrfB/rrlB | 5S ribosomal RNA/23S ribosomal RNA |
| ? | minE | 2358126 = | 7 (0.140) | intergenic (‑30/+64) | rrfA/rrlA | 5S ribosomal RNA/23S ribosomal RNA | |||||
CCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGtctgat‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2270836‑2270768‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCT > minE/2358126‑2358201 CCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC < 1:2391637/71‑1CCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC < 1:3565960/71‑1CCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC < 1:2386925/71‑1 GAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT > 1:601161/1‑70 GAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT > 1:3706662/1‑70 GAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT > 1:2748281/1‑70 GAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG < 1:159744/71‑1 GAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT > 1:3768819/1‑70 GAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT > 1:2713684/1‑70 AAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA > 1:623392/1‑71 AAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG > 1:315563/1‑70 AAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA < 1:2454998/71‑1 AAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA > 1:2221733/1‑71 AGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA > 1:3245181/1‑70 AGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA > 1:990814/1‑70 gaTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATg < 1:2980320/69‑2 gaTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC > 1:2781614/3‑66 ATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG < 1:1865455/55‑1 AGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATg < 1:1144555/53‑2 GATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG > 1:1536299/1‑46 GATTTACAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG > 1:2334999/1‑46 TTTTCAGCCTGATACAGATTAAATCAGAACGCCGAAGCGGTC < 1:1868479/42‑1 TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG > 1:1944198/1‑43 CAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGTCTGAAAATCTTCTCTCAA > 1:575552/1‑55 CAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC‑ATCCGCCAAAACAGCTTC > 1:1190819/1‑71 CAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAA > 1:3301983/1‑44 AGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGG > 1:1041622/1‑36 AACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCC < 1:3901815/58‑1 TCTTATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACA > 1:2977820/1‑51 TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTT > 1:1484984/1‑70 TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCG < 1:1091021/60‑1 TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCG < 1:2257065/60‑1 TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACA > 1:3245327/1‑51 TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACA > 1:3839997/1‑51 CTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTA < 1:3628522/70‑1 CTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTT > 1:3683578/1‑69 CTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTA < 1:2129674/64‑1 TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGC > 1:1563681/1‑42 TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTC > 1:3018278/1‑35 ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCC < 1:674811/71‑1 ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAA < 1:2533304/68‑1 TTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCT < 1:2813630/71‑1 TTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAAC < 1:2785113/45‑1 CCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGtctgat‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2270836‑2270768‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCT > minE/2358126‑2358201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |