New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	minE	2305139 =	95 (1.830)	4 (0.080)	3/94	NT	5.0%	coding (45/2199 nt)	priA	primosome factor n'
	?	minE	2305177 =	66 (1.380)					coding (83/2199 nt)	priA	primosome factor n'
Rejected: Frequency below/above cutoff threshold.

GTTTGCCAAACGGCACGCGCACGCGACACCCAGCTTTAACCGTCATGCCTTCTGGCAGCAGATAGTCAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  minE/2305209‑2305139 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGAGCGCATCGGGATTGTGGTATCAGTTAGCGA  >  minE/2305177‑2305246                                                                                                                                               GTTTGCCAAACGGCACGCGCACGCGACACCCAGCTTTAACCGTCATGCCTTCTGGCAGCAGATAGTCAAAG                                                                        >  1:1031356/1‑71                CGCGCACGCGACACCCAGCTTTAACCGTCATGCCTTCTGGCAGCAGATAGTCA                                                                           <  1:1510580/53‑1                                AGCTTTAACCGTCATGCCTTCTGGCAGCAGATAGTCAAAGCTGGGTGTCGCGTGCGCGTGCCGTTT                                              <  1:1137351/66‑1                                                  TTCTGGCAGCAGATAGTTAAAGCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGA                                <  1:2869923/62‑1                                                    CTGGCAGCAGATAGTCAAAGCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGAGC                              >  1:165807/1‑62                                                    CTGGCAGCAGATAGTCAAAGCTGGGTGTCGCGTGCGCG                                                      >  1:3293906/1‑38                                                                    AAAGCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGAGCGCATCGGGATTGTGGTATCAGTTAG     >  1:1342651/1‑71                                                                     AAGCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGAGCGCATCGGGATTGTGGTATCAGTTAGC    <  1:2951424/71‑1                                                                     AAGCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGAGCGCATCGGGATTGTGGTATCAGTTAG     <  1:357143/70‑1                                                                      AGCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGAGCGCATCGGGATTGTGGTATCAGTTAGCG   <  1:1594557/71‑1                                                                      AGCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGAGCGCATCGGGATTGTGGTATCAGTTAGCG   <  1:2161697/71‑1                                                                       GCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGAGCGCATCGGGATTGTGGTATCAGTTAGCGA  >  1:167970/1‑71                                                                       GCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGAGCGCATAGGGATTGTGGTATC           >  1:136188/1‑62                                                                                                                                               GTTTGCCAAACGGCACGCGCACGCGACACCCAGCTTTAACCGTCATGCCTTCTGGCAGCAGATAGTCAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  minE/2305209‑2305139 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGAGCGCATCGGGATTGTGGTATCAGTTAGCGA  >  minE/2305177‑2305246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.