| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2455285 | NA (NA) | 6 (0.130) | 3/92 | NT | NA | noncoding (1524/1542 nt) | rrsC | 16S ribosomal RNA |
| ? | minE | 2764774 = | NA (NA) | noncoding (1512/1542 nt) | rrsE | 16S ribosomal RNA | |||||
TTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2455213‑2455285‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccgTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGT > minE/2764774‑2764843 TTCACTTTCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAAC > 1:2811640/1‑71TTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAAC > 1:3171080/1‑71TTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCA < 1:3879577/69‑1 TCACTTTCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAAC < 1:1855219/70‑1 TCACTTTCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAAC > 1:2732840/1‑70 TCACTTTCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAA < 1:931770/69‑1 CACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAACCG > 1:620385/1‑71 CACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAACCG > 1:2538931/1‑71 ACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAACCG < 1:793522/70‑1 CAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGGTCCAACCG > 1:939189/1‑57 CAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGG‑GGTGATCCAACCGTAGGGGAACCTGCGG > 1:1465820/1‑71 CTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGTAGGGGAACCTGCGGTT > 1:1245595/1‑59 CTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAA > 1:866900/1‑39 CAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAAC > 1:3079770/1‑37 CAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAAC > 1:659022/1‑37 CAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAAC > 1:2344944/1‑37 CAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAA > 1:841737/1‑36 CAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAA > 1:3876646/1‑36 CAAAGAACGCTTCTATAAGGTAAGGAGGTGATCCAACAGTAGGGGAACa > 1:3299057/1‑48 GCTTCTTTAAGGTAAGGAGGTGATCCAACCGTAGGGGAACCTGCGG < 1:1817142/46‑1 TTCTTTAAGGTAAGGAGGTGATCCAACCGTAGGGGAACCTGCG < 1:627304/43‑1 TTCTTTAAGGTAAGGAGGTGATCCAACCGTAGGGGAACCTGCG < 1:46496/43‑1 AACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACA > 1:1614309/1‑67 AACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACA > 1:2985246/1‑67 AACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACA > 1:2206519/1‑67 AACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACA > 1:1982376/1‑67 AACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACA > 1:594986/1‑67 AACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGC > 1:26308/1‑48 AACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAA > 1:1073909/1‑43 AACCGTAGGGCAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACA > 1:2407202/1‑67 AACCGTAGCGGAACCTGCGGTTTGATCACCTCCTTACCTTAAAG > 1:2073289/1‑44 ACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGAT > 1:3470234/1‑71 ACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGA < 1:1906364/70‑1 ACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGA < 1:1761412/70‑1 ACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAG > 1:2813132/1‑43 CCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATT > 1:3265823/1‑71 CCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATT > 1:1579570/1‑71 CCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATT > 1:988240/1‑71 CGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTT < 1:542714/51‑1 CGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACT < 1:2398533/50‑1 GTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGT < 1:3297840/71‑1 GTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAA < 1:3854378/38‑1 TTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAAGGTAAGGAGGTGATCCAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2455213‑2455285‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccgTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGT > minE/2764774‑2764843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |