| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2464723 = | 78 (1.510) | 3 (0.070) | 3/90 | NT | 4.7% | coding (381/816 nt) | atpB | F0 sector of membrane‑bound ATP synthase, subunit a |
| ? | minE | 2464743 = | 54 (1.180) | coding (401/816 nt) | atpB | F0 sector of membrane‑bound ATP synthase, subunit a | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2464797‑2464723‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgtacTGGGTCTGCCTGCACTGCGTGTGGTTCCGTCTGCGGACGTGAACGTAACGCTGTCTATGGCACTGGGC > minE/2464743‑2464810 GACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAAT > 1:31691/1‑71GACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAA < 1:1059981/70‑1 GCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTAC < 1:440821/71‑1 CGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAAT > 1:1186522/1‑55 CAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAAT > 1:970287/1‑49 CAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAAT > 1:1586578/1‑49 AACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAAT > 1:336767/1‑42 AACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAA > 1:3012096/1‑41 CACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAAT < 1:3028110/39‑1 ACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTA > 1:2487699/1‑41 ACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTA > 1:1628420/1‑41 ACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTA > 1:3490281/1‑41 ACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTA > 1:1567108/1‑39 CAGTACATGTTCAGCAATGTACTGGGTCTGCCTGCACTGCGTGTGGTTCCGTCT < 1:1754127/54‑1 AGTACATGTTCAGCAATGTACTGGGTCTGCCTGCACTGCGTGTGGTTCCGTCTGCGGACGTGAA > 1:2687943/1‑64 TACATGTTCAGCAATGTACTGGGTCTGCCTGCACTGCGTGTGGTTCCGTCTGCGGACGTGAACGTAACG < 1:377841/69‑1 AGCAATGTACTGTGTCTGCCTGCACTGCGTGTGGTTCCGTCTGCGGACGTGAACGTAACGCTGTCTATGG < 1:3109335/70‑1 ATGTACTGGGTCTGCCTGCACTGCGTGTGGTTCCGTCTGCGGACGTGAACGTAACGCTGTCTATGGCACTG > 1:1967435/1‑71 GTACTGGGTCTGCCTGCACTGCGTGTGGTTCCGTCTGCGGACGTGAACGTAACGC < 1:481599/55‑1 TACTGGGTCTGCCTGCACTGCGTGTGGTTCCGTCTGCGGACGTGAACGTAACGCTGTCTATGGCACTGGGC > 1:2591464/1‑71 GACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2464797‑2464723‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgtacTGGGTCTGCCTGCACTGCGTGTGGTTCCGTCTGCGGACGTGAACGTAACGCTGTCTATGGCACTGGGC > minE/2464743‑2464810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |