| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2547200 = | 62 (1.200) | 3 (0.060) | 3/92 | NT | 5.4% | coding (289/933 nt) | rfaD | ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding |
| ? | minE | 2547230 = | 50 (1.070) | coding (259/933 nt) | rfaD | ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding | |||||
TTTTCCACGAAGGCGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2547274‑2547200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atactTGCCGTCCCACTCGGTGGTGGAAGAGCACGCGCCTTCGTGGAAAATCGCTTCGACATCGCCGAACTCT > minE/2547230‑2547297 TTTTCCACGAAGGCGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAA < 1:874843/71‑1TTTTCCACGAAGGCGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAA < 1:1497295/71‑1 TTTCCACGAAGGCGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAA > 1:1600810/1‑70 TCCACGAAGGCGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGGTAACAACTATCAATAC > 1:1840524/1‑71 CCACGAAGGCGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATA < 1:3108087/69‑1 GCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACT > 1:3326541/1‑57 CCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATA > 1:127818/1‑49 CCACCACAGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATAC > 1:1807786/1‑50 ACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAAT > 1:2235838/1‑43 ACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAAT > 1:3234068/1‑43 ACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAA > 1:2196793/1‑42 CGAGTGGGACGGCAAGTATATCATGGATAACAACTATCAA > 1:3370683/1‑40 AGTGGGACGGCAAGTATATGATGGATAACAACTATCAAT > 1:3321098/1‑39 GACGGCAAGTATATGATGGATAACAACTATCAATAC < 1:2740717/36‑1 ATGATGGATAACAACTATCAATACTTGCCGTCCCACTCGGTGGTGGAAG < 1:863685/49‑1 TGATGGATAACAACTATCAATACTTGCCGTCCCACTCGGTGGTGGAAGAGCACGCGCCTTCGTGGAAAATC > 1:1505652/1‑71 TGGATAACAACTATCAATACTTGCCGTCCCACTCGGTG < 1:3615615/38‑1 ATACTTGCCGTCCCACTCGGTGGTGGAAGAGCACGCGCCTTCGTGGAAAATCGCTTCGACATCGCCGAACT > 1:3721388/1‑71 ATACTTGCCGTCCCACTCGGTGGTGGAAGAGCACGCGCCTTCGTGGAAAATCGCTTCGACATCGCCGAAC > 1:2396195/1‑70 ATACTTGCCGTCCCACTCGGTGCTGGAAGAGCACGCGCCTTC > 1:675544/1‑42 ACTTGCCGTCCCACTCGGTGGTGGAAGAGCACGCGCCTTCGTGGAAAATCGCTTC > 1:1519090/1‑55 CTTGCCGTCCCACTCGGTGGTGGAAGAGCACGCGCCTTCGTGGAAAATCGCTTCGACATCGCCGAACTCT < 1:2270163/70‑1 CTTGCCGTCCCACTCGGTGGTGGAAGAGCACGCGCCTTCGTGGAAAATCGCTTCGACATCGCCGAACTCT < 1:1269708/70‑1 CTTGCCGTCCCACTCGGTGGTGGAAGAGCACGCGCCTTCGTGGAAAATCGCTT > 1:3454149/1‑53 CTTGCCGTCCCACTCGGTGGTGGAAGAGCACGCGCCTTCGTG < 1:425623/42‑1 TTTTCCACGAAGGCGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2547274‑2547200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atactTGCCGTCCCACTCGGTGGTGGAAGAGCACGCGCCTTCGTGGAAAATCGCTTCGACATCGCCGAACTCT > minE/2547230‑2547297 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |