| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2835791 | 42 (0.810) | 3 (0.070) | 3/86 | NT | 7.1% | coding (106/870 nt) | yjeJ | hypothetical protein |
| ? | minE | = 2835797 | 43 (0.980) | coding (100/870 nt) | yjeJ | hypothetical protein | |||||
CAGTTTATGCTTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2835717‑2835791‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaagaaTCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCTGATTGCGCTGGAAAGTCGTCTGCATCAAA < minE/2835797‑2835728 CAGTTTATGCTTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATA < 1:997134/70‑1 AGTTTATGCTTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAA < 1:729791/71‑1 GTTTATGCTTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAG < 1:1351546/71‑1 TTATGCTTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTACATGACAGACATAAAGAA > 1:699887/1‑71 TATGCTTTTGATGCAGGCGCCTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAG > 1:2423835/1‑68 TTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATTACAGACATAAAG < 1:1375914/63‑1 GCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAGAATCGTTGTTCTTT < 1:3285246/55‑1 GCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAGAATCGTTGTTCTTTAT > 1:2244035/1‑55 CAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAGAATCGTTGTTCTTTAT > 1:2848281/1‑54 TAAAGAATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCT < 1:2253110/48‑1 TAAAGAATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCT < 1:3430291/48‑1 AAGAATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGCCCTGCTGATTGCGC > 1:3154337/1‑54 GAATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCTGATTGCGCTGGAAAGTCGTCTGCATCA < 1:1566645/71‑1 AATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCTGATTGCGCT > 1:1702398/1‑52 ATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCTGATTGCGCTGGAAAGTCGTCTGCATCAAA < 1:3243429/71‑1 CAGTTTATGCTTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2835717‑2835791‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaagaaTCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCTGATTGCGCTGGAAAGTCGTCTGCATCAAA < minE/2835797‑2835728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |