New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? minE = 283579142 (0.810)3 (0.070) 3/86 NT 7.1% coding (106/870 nt) yjeJ hypothetical protein
?minE = 2835797 43 (0.980)coding (100/870 nt) yjeJ hypothetical protein

CAGTTTATGCTTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/2835717‑2835791
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaagaaTCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCTGATTGCGCTGGAAAGTCGTCTGCATCAAA  <  minE/2835797‑2835728
                                                                                                                                                 
CAGTTTATGCTTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATA                                                                             <  1:997134/70‑1
 AGTTTATGCTTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAA                                                                           <  1:729791/71‑1
  GTTTATGCTTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAG                                                                          <  1:1351546/71‑1
    TTATGCTTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTACATGACAGACATAAAGAA                                                                        >  1:699887/1‑71
     TATGCTTTTGATGCAGGCGCCTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAG                                                                          >  1:2423835/1‑68
          TTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATTACAGACATAAAG                                                                          <  1:1375914/63‑1
                                GCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAGAATCGTTGTTCTTT                                                            <  1:3285246/55‑1
                                  GCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAGAATCGTTGTTCTTTAT                                                          >  1:2244035/1‑55
                                   CAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAGAATCGTTGTTCTTTAT                                                          >  1:2848281/1‑54
                                                                    TAAAGAATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCT                               <  1:2253110/48‑1
                                                                    TAAAGAATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCT                               <  1:3430291/48‑1
                                                                      AAGAATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGCCCTGCTGATTGCGC                       >  1:3154337/1‑54
                                                                        GAATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCTGATTGCGCTGGAAAGTCGTCTGCATCA    <  1:1566645/71‑1
                                                                         AATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCTGATTGCGCT                      >  1:1702398/1‑52
                                                                          ATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCTGATTGCGCTGGAAAGTCGTCTGCATCAAA  <  1:3243429/71‑1
                                                                                                                                                 
CAGTTTATGCTTTTGATGCAGACGACTTTCCAGCGCAATCAGCAGGTCGCGCAGTTCCATGACAGACATAAAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/2835717‑2835791
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaagaaTCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCTGATTGCGCTGGAAAGTCGTCTGCATCAAA  <  minE/2835797‑2835728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.