| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2957082 | 77 (1.490) | 3 (0.070) | 3/84 | NT | 4.9% | coding (1379/1590 nt) | prfC | peptide chain release factor RF‑3 |
| ? | minE | = 2957099 | 54 (1.270) | coding (1396/1590 nt) | prfC | peptide chain release factor RF‑3 | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATCGTTGGTGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2957012‑2957082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacgttgaCTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAACTGCAGCA < minE/2957099‑2957031 ATCGTTGGTGCAGTTGGTGTGCTGCAGTTTTATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTGA < 1:2372036/71‑1ATCGTTGGTGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTG < 1:13370/70‑1ATCGTTGGTGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTG < 1:2666501/70‑1ATCGTTGGTGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACG < 1:75233/67‑1ATCGTTGGTGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACG < 1:1132769/67‑1ATCGTTGGTGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACG < 1:69835/67‑1ATCGTTGGTGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACG < 1:35371/67‑1ATCGTTGGTGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACG < 1:3015114/67‑1 TCGTTGGTGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTG > 1:3581548/1‑69 TGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTG < 1:3668104/62‑1 TTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTG < 1:2107183/57‑1 TTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTG < 1:3500097/57‑1 TTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACG > 1:1272121/1‑54 TGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTGACTGACTCATACACTGCTTC < 1:1234459/71‑1 GCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTGACTGACTCATACAGTGCTTCAACG > 1:3900732/1‑71 CAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTGACTGACTCATACACTGCTTCAACG < 1:346443/70‑1 AACGTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAACT > 1:2394365/1‑71 AACGTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAG > 1:2635860/1‑48 AACGTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAG > 1:259768/1‑48 ACGTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAACaa > 1:15061/1‑69 ACGTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAACTG > 1:2948578/1‑71 ACGTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAACTG > 1:1734244/1‑71 ACGTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAACTG < 1:432293/71‑1 ACGTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAACTG < 1:1304900/71‑1 ACGTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAACTG < 1:355347/71‑1 ACGTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAACTG < 1:3895547/71‑1 CGTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAA > 1:1780534/1‑67 CGTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCA < 1:3499228/65‑1 GTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCA < 1:1391493/44‑1 GTTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCA < 1:3169664/44‑1 TTGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGC < 1:3805257/46‑1 TGACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAACTGCAG > 1:523854/1‑70 GACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAACTGCAGCA > 1:1709308/1‑71 GACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGC > 1:1534156/1‑44 GACTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGC > 1:1371961/1‑44 ATCGTTGGTGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2957012‑2957082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacgttgaCTGACTCATACACTGCTTCAACGTTGTATTCGCTCTTCAGGCGCGCTACCACCACATCAAACTGCAGCA < minE/2957099‑2957031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |