| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2975691 = | 49 (0.950) | 3 (0.070) | 3/88 | NT | 7.4% | coding (1122/1668 nt) | yjjK | fused predicted transporter subunits and ATP‑binding components of ABC superfamily |
| ? | minE | 2975721 = | 33 (0.740) | coding (1092/1668 nt) | yjjK | fused predicted transporter subunits and ATP‑binding components of ABC superfamily | |||||
CGATCGTCGGGATCATCGGTCCGAACGGTGCGGGTAAATCGACCCTGTTCCGTATGATCTCTGGTCAGGAACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2975764‑2975691‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaacagGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTC > minE/2975721‑2975787 CGATCGTCGGGATCATCGGTCCGAACGGTGCGGGTAAATCGACCCTGTTCCGTATGATCTCTGGTCAGGAA < 1:436512/71‑1 TCGTCGGGATCATCGGTCCGAACGGTGCGGGTAAATCGACCCTGTTCCGTATGATCTCTGGTCAGGAACAG < 1:1143887/71‑1 TCGTCGGGATCATCGGTCCGAACGGTGCGGGTAAATCGACCCTGTTCCGTATGATCTCTGGTCAGGAACAG > 1:2457606/1‑71 TCGTCGGGATCATCGGTCCGAACGGTGCGGGTAAATCGACCCTGTTCCGTATGATCTCTGGTCAGGAACAG > 1:3699947/1‑71 CGGTCCGAACGGTGCGGGTAAATCGACCCTGTTCCGTATGATCTCTGGTCAG > 1:2874070/1‑52 CGGTGCGGGTAAATCGACCCTGTTCCGTATGATCTCTGGTCAGGAA < 1:2213137/46‑1 CGGTGCGGGTAAATCGACCCTGTTCCGTATGATCTCTGGTCAGGAA < 1:2753671/46‑1 AAATCGACCCTGTTCCGTATGATCTCTGGTCAGGA < 1:1304041/35‑1 AAATCGACCCTGTTCCGTATGATCTCTGGTCAGGA < 1:2313652/35‑1 GACCCTGTTCCGTATGATCTCTGGTCAGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCC > 1:3140765/1‑70 CCGTATGATCTCTGGTCAGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCT > 1:2322386/1‑71 TGATCTCTGGTCAGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTT > 1:251913/1‑71 GGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCAGACGA > 1:117853/1‑48 GAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACG < 1:3877270/46‑1 AACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAtg < 1:863728/69‑3 ACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTC < 1:1675904/71‑1 CAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAG < 1:11627/64‑1 CGATCGTCGGGATCATCGGTCCGAACGGTGCGGGTAAATCGACCCTGTTCCGTATGATCTCTGGTCAGGAACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2975764‑2975691‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaacagGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTC > minE/2975721‑2975787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |