| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 464953 = | 42 (0.810) | 8 (0.250) +AAGTTCAGCGATCTACATTA |
6/62 | NT | 24.3% | intergenic (+93/‑208) | sdhB/sucA | succinate dehydrogenase, FeS subunit/2‑oxoglutarate decarboxylase, thiamin‑requiring |
| ? | minE | = 2870826 | 40 (0.770) | intergenic (+69/‑111) | rnr/rlmB | exoribonuclease R, RNase R/23S rRNA (Gm2251)‑methyltransferase | |||||
CAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGA > minE/464883‑465022 | cAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCg < 1:717654/71‑1 (MQ=255) gCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAg > 1:2090073/1‑71 (MQ=255) cAGGCAACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGAt > 1:416823/1‑69 (MQ=255) cAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGAt > 1:2314724/1‑69 (MQ=255) aGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGTCTGATaa < 1:3825621/70‑1 (MQ=255) ggCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAagc < 1:77447/71‑1 (MQ=255) ggCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAagc < 1:2105468/71‑1 (MQ=255) gCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATaa > 1:2867374/1‑68 (MQ=255) aaCCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAagcgca < 1:3608131/71‑1 (MQ=255) ccAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAagcgcagc > 1:1124538/1‑71 (MQ=255) cAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAagcgcagcg < 1:1977100/71‑1 (MQ=255) tgcgctttgttcatgccggatgcggctaatgtagatcgctgaacttGTAGGCCTGATAagcg < 1:1276429‑M1/16‑1 (MQ=255) ccGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATc < 1:640026/70‑1 (MQ=255) cgctttgttcatgccggatgcggctaatgtagatcgctgaacttGTAGGCCTGATAAGCGCAGCGTATc > 1:2712‑M1/45‑69 (MQ=255) cGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAg < 1:3508786/71‑1 (MQ=255) cGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAg < 1:305321/71‑1 (MQ=255) tttgttcatgccggatgcggctaatgtagatcgctgaacttGTAGGCCTGATAAGCGCAGCGTATCAGGc < 1:3419840‑M1/29‑1 (MQ=255) tttgttcatgccggatgcggctaatgtagatcgctgaacttGTAGGCCTGATAAGCGCAGCGTATCAGGc < 1:1485663‑M1/29‑1 (MQ=255) aTGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCg > 1:229141/1‑71 (MQ=255) aTGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCg > 1:2504821/1‑71 (MQ=255) tcatgccggatgcggctaatgtagatcgctgaacttGTAGGCCTGATAagcgca > 1:481597‑M1/37‑54 (MQ=255) gcgTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACa < 1:2076737/71‑1 (MQ=255) gcgTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACa < 1:3523347/71‑1 (MQ=255) cgTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTaa > 1:1172687/1‑68 (MQ=255) gTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCg > 1:3884521/1‑64 (MQ=255) atgccggatgcggctaatgtagatcgctgaacttGTAGGCCTGATAAGCGCAGCGTATCAgg < 1:205375‑M1/28‑1 (MQ=255) gAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAg > 1:2389532/1‑70 (MQ=255) ccggatgcggctaatgtagatcgctgaacttGTAGGCCTGATaagcgcagcgt > 1:3636673‑M1/32‑52 (MQ=255) ccggatgcggctaatgtagatcgctgaacttGTAGGCCTGATAAGCGCAGCGTATc < 1:2391100‑M1/25‑1 (MQ=255) ccTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGaaa > 1:1431769/1‑68 (MQ=255) ccTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGaaa > 1:602306/1‑68 (MQ=255) ccTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATg > 1:2864878/1‑70 (MQ=255) cTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATg > 1:1777396/1‑69 (MQ=255) tATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAg > 1:1865934/1‑70 (MQ=255) tATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAg > 1:276716/1‑70 (MQ=255) tATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAg > 1:2189667/1‑70 (MQ=255) aTCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAgg > 1:1421579/1‑70 (MQ=255) cGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAAt > 1:3527092/1‑71 (MQ=255) gCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGaaa > 1:2503783/1‑59 (MQ=255) gCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGaaa > 1:3270460/1‑59 (MQ=255) tagatcgctgaacttGTAGGCCTGATAagcgcagc > 1:3587576‑M1/16‑35 (MQ=255) aCAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAgg < 1:1568477/61‑1 (MQ=255) aCAAGTCATTACCCGTAGGCCTGATAAGCGAAGCGCATCAGGCGTAACaaa > 1:166382/1‑51 (MQ=255) cAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTaa < 1:3570074/70‑1 (MQ=255) cAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTaa < 1:1594816/70‑1 (MQ=255) cAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTaa > 1:11605/1‑70 (MQ=255) gTCATTACCCGTAGGCCTGATAAGCGCAGCGCATc > 1:1004768/1‑35 (MQ=255) gTCATTACCCGTAGGCCTGATAAGCGCAGCGCATc > 1:185025/1‑35 (MQ=255) gTCATTACCCGTAGGCCTGATAAGCGCAGCGCATc > 1:1280839/1‑35 (MQ=255) gTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTa > 1:1304424/1‑66 (MQ=255) gTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAAc > 1:266149/1‑71 (MQ=255) cATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACaaa > 1:786113/1‑45 (MQ=255) ttACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCttt < 1:2292065/61‑1 (MQ=255) gTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGa > 1:3145874/1‑70 (MQ=255) | CAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGA > minE/464883‑465022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |