New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	minE	865596 =	7 (0.140)	5 (0.100)	3/100	NT	17.6%	intergenic (+1/‑210)	yciQ/rluB	predicted inner membrane protein/23S rRNA pseudouridylate synthase
	?	minE	865626 =	40 (0.790)					intergenic (+31/‑180)	yciQ/rluB	predicted inner membrane protein/23S rRNA pseudouridylate synthase

TTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCA  >  minE/865527‑865657                                                                      |                                                              ccttaagtaaacgactcgacgtttatcggcctggctttgaggcgcaacatactacactatctttatggtt                                                               <  1:235080‑M1/1‑1 (MQ=255)  cttaagtaaacgactcgacgtttatcggcctggctttgaggcgcaacatactacactatctttatggtt                                                               <  1:1152325‑M1/1‑1 (MQ=255)                               ctggctttgaggcgcaacatactacactatctttatggtTTAAGCTGATGTTAATCGaa                                            >  1:1300497‑M1/40‑59 (MQ=255)                                 ggctttgaggcgcaacatactacactatctttatggtTAAAGCTGATGTTAATCGAAAc                                          <  1:2527206‑M1/22‑1 (MQ=255)                                 ggctttgaggcgcaacatactacactatctttatggtTAAAGCTGATGTTAATCGAAAc                                          <  1:3149156‑M1/22‑1 (MQ=255)                                 ggctttgaggcgcaacatactacactatctttatggtTAAAGCTGATGTTAATCGAAAc                                          <  1:3153589‑M1/22‑1 (MQ=255)                                             caacatactacactatctttatggtTTAAGCTGATGTTAATCGAAACAAGCttt                                   >  1:685014‑M1/26‑54 (MQ=255)                                                cGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAg                                       >  1:1691058/1‑47 (MQ=255)                                                cGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGa                        <  1:904774/62‑1 (MQ=255)                                                 ggAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTgtagta              >  1:2433615/1‑71 (MQ=255)                                                 ggAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTgtagta              >  1:702911/1‑71 (MQ=255)                                                       ggtggtGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGt           <  1:602858/68‑1 (MQ=255)                                                            tggCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAgt                    <  1:3869830/54‑1 (MQ=255)                                                              gCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCa  >  1:2650242/1‑70 (MQ=255)                                                                     aTTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATa                      >  1:1858803/1‑43 (MQ=255)                                                                      |                                                              TTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCA  >  minE/865527‑865657

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.