| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1310343 = | 66 (1.270) | 3 (0.070) | 3/86 | NT | 6.1% | intergenic (+19/‑127) | hisL/hisG | his operon leader peptide/ATP phosphoribosyltransferase |
| ? | minE | 1310367 = | 36 (0.820) | intergenic (+43/‑103) | hisL/hisG | his operon leader peptide/ATP phosphoribosyltransferase | |||||
TATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCC > minE/1310273‑1310409 | tATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGc > 1:1984621/1‑71 (MQ=255) atcaaccgcgcaataaaaaagcccccggaaggtgatcttccgggggctttctcatgcgttcatgcaccaCt < 1:2839749‑M1/2‑1 (MQ=255) acacGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTgg < 1:141521/70‑1 (MQ=255) cacGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTgg > 1:1697172/1‑69 (MQ=255) cacGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGaa < 1:1391777/71‑1 (MQ=255) gcgTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAg > 1:3501194/1‑69 (MQ=255) gcgTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGa > 1:3131693/1‑70 (MQ=255) gcgTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGa > 1:3733601/1‑70 (MQ=255) gcgTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGa > 1:1685176/1‑70 (MQ=255) cAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACa > 1:451490/1‑67 (MQ=255) cAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACAtt > 1:3177439/1‑69 (MQ=255) cAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTc < 1:471534/70‑1 (MQ=255) cAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTCTCAGGCGATGTGTGCTGGAAGACa > 1:3938691/1‑67 (MQ=255) tttAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACAtt > 1:1185684/1‑66 (MQ=255) tttAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACAtt > 1:3255403/1‑66 (MQ=255) tttAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACAt > 1:2152865/1‑65 (MQ=255) aaaCACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCt < 1:1284940/70‑1 (MQ=255) aaaCACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCt < 1:3471772/70‑1 (MQ=255) aaaCACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCt < 1:354616/70‑1 (MQ=255) aaaCACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCt < 1:2175246/70‑1 (MQ=255) aaaCACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCt < 1:2023851/70‑1 (MQ=255) aaaCACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCt < 1:3899980/70‑1 (MQ=255) aaCACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCt < 1:3484704/69‑1 (MQ=255) aaCACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTc < 1:2710545/71‑1 (MQ=255) acacCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTcc < 1:3268856/71‑1 (MQ=255) ccaccaTCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAgt > 1:2566711/1‑71 (MQ=255) caccatcatcaccatcatCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAgt < 1:3686171/70‑1 (MQ=255) ggaaggtgatcttccgggggctttctcatgcgttcatgcaccaCTGGAAGACATTCAGAt < 1:3193191‑M1/17‑1 (MQ=255) ccatcatcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACAtt > 1:2620818/1‑55 (MQ=255) catcatcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGa < 1:3789168/47‑1 (MQ=255) atcatcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCtt > 1:1741398/1‑61 (MQ=255) tcatcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGc < 1:2493527/41‑1 (MQ=255) tcatcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGa < 1:778430/56‑1 (MQ=255) tcatcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGa < 1:3848845/56‑1 (MQ=255) tcatcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCa > 1:2764340/1‑71 (MQ=255) atcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATc > 1:934513/1‑56 (MQ=255) atcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATc > 1:1225502/1‑56 (MQ=255) atcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCAt > 1:372852/1‑70 (MQ=255) atcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCAt > 1:1564996/1‑70 (MQ=255) atcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATg < 1:2155060/71‑1 (MQ=255) atcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATg < 1:719129/71‑1 (MQ=255) atcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATg < 1:3933842/71‑1 (MQ=255) atcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGAAATTCAGATCTTCCAGTGGTGCAt > 1:1369939/1‑70 (MQ=255) tcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAgt < 1:37115/62‑1 (MQ=255) tcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAgt < 1:3013476/62‑1 (MQ=255) tcaccatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGa < 1:3602750/71‑1 (MQ=255) accatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAAc > 1:3818577/1‑71 (MQ=255) accatcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAAc > 1:3717830/1‑71 (MQ=255) tcatcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCAt < 1:3086686/71‑1 (MQ=255) atcCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAgtg > 1:3254404/1‑55 (MQ=255) gggggctttctcatgcgttcatgcaccaCTGGAAGACATTCAGATCTTCCAgtg < 1:1387082‑M1/26‑1 (MQ=255) ccTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAgtg < 1:1621327/53‑1 (MQ=255) cTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTc > 1:417602/1‑39 (MQ=255) cTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAg > 1:3086015/1‑41 (MQ=255) cTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATgaga < 1:756984/70‑1 (MQ=255) cTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATgaga < 1:3452580/70‑1 (MQ=255) tGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAgtggt > 1:3713327/1‑53 (MQ=255) tGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATgaga > 1:3412122/1‑69 (MQ=255) gctttctcatgcgttcatgcaccaCTGGAAGACATTCAGATCTTCCa < 1:1827193‑M1/23‑1 (MQ=255) aCTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAgtggtg > 1:334633/1‑52 (MQ=255) gTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGcccc < 1:873644/70‑1 (MQ=255) tCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATga < 1:3874301/60‑1 (MQ=255) tttCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGaa > 1:3884750/1‑51 (MQ=255) tttCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACg < 1:2972630/53‑1 (MQ=255) tttCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCgg > 1:131022/1‑70 (MQ=255) cAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCg > 1:3851815/1‑66 (MQ=255) cAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGaa < 1:3657220/69‑1 (MQ=255) aGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGa < 1:1743097/70‑1 (MQ=255) aGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGa < 1:1607039/70‑1 (MQ=255) gCGATGTGTGCTGGAAGACTTTCAGATCTTCCAgtg < 1:2904975/36‑1 (MQ=255) gCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCa < 1:2223959/71‑1 (MQ=255) gCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCa > 1:2676923/1‑71 (MQ=255) cGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGaa < 1:2164633/54‑1 (MQ=255) gATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCAcc > 1:614297/1‑71 (MQ=255) gATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCAcc > 1:3800779/1‑71 (MQ=255) gtgtgCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCt > 1:465124/1‑69 (MQ=255) tgtgCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATgaga < 1:540785/48‑1 (MQ=255) tgtgCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATga < 1:1266866/46‑1 (MQ=255) tgtgCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGccc < 1:392868/54‑1 (MQ=255) tgtgCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTcc < 1:1858073/71‑1 (MQ=255) tgtgCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTc < 1:879604/70‑1 (MQ=255) tgCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATgaga > 1:1427751/1‑46 (MQ=255) | TATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAGTCTTTCAGGCGATGTGTGCTGGAAGACATTCAGATCTTCCAGTGGTGCATGAACGCATGAGAAAGCCCCCGGAAGATCACCTTCC > minE/1310273‑1310409 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |