| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2957605 = | 57 (1.100) | 3 (0.060) | 3/94 | NT | 5.5% | intergenic (+312/‑81) | prfC/osmY | peptide chain release factor RF‑3/periplasmic protein |
| ? | minE | 2957623 = | 51 (1.070) | intergenic (+330/‑63) | prfC/osmY | peptide chain release factor RF‑3/periplasmic protein | |||||
GATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATA > minE/2957535‑2957672 | tagtcatcgatttattcctgtatgtttgctcgtaatttgagcctggcaacacgaggttgcattgctgaata > 1:10323‑M1/71‑71 (MQ=255)tagtcatcgatttattcctgtatgtttgctcgtaatttgagcctggcaacacgaggttgcattgctgaata > 1:3132645‑M1/71‑71 (MQ=255) agtcatcgatttattcctgtatgtttgctcgtaatttgagcctggcaacacgaggttgcattgctgaatAg < 1:1945263‑M1/2‑1 (MQ=255) aTTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTagag > 1:3125990/1‑71 (MQ=255) cAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAggg < 1:2332647/70‑1 (MQ=255) cAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGt > 1:3663781/1‑71 (MQ=255) gagGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTg > 1:981688/1‑70 (MQ=255) agGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGaa < 1:817115/71‑1 (MQ=255) ggCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGaa > 1:1429626/1‑70 (MQ=255) tAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGtctct > 1:3512199/1‑71 (MQ=255) aTGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTcc > 1:687810/1‑71 (MQ=255) tGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTccc > 1:1181562/1‑71 (MQ=255) ggTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGaa > 1:3688467/1‑61 (MQ=255) cGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGtc < 1:3619367/61‑1 (MQ=255) gTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTaga < 1:1871287/50‑1 (MQ=255) gTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGATGGTGAAGTCTCTCCCTAtt > 1:3814923/1‑70 (MQ=255) tgtttgctcgtaatttgagcctggcaacacgaggttgcattgctgaatAGGGTGAAGTCTCTCCCTATTc > 1:3884590‑M1/49‑70 (MQ=255) aTTAATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAg > 1:3630085/1‑70 (MQ=255) ttCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCa < 1:418/71‑1 (MQ=255) ttCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCa < 1:517160/71‑1 (MQ=255) catcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAg > 1:3382665/1‑52 (MQ=255) catcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAAt > 1:1395692/1‑71 (MQ=255) atcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAg > 1:2944562/1‑51 (MQ=255) atcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAAt < 1:3797621/70‑1 (MQ=255) atcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATg < 1:3241277/71‑1 (MQ=255) tcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCaa > 1:3834205/1‑68 (MQ=255) tcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCaa > 1:3829713/1‑68 (MQ=255) tcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCaa > 1:1003882/1‑68 (MQ=255) tcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATg > 1:1830762/1‑70 (MQ=255) tcaCTCATCGCTTTTGTGATGGAGACCATTGACTTCTGTAGAGGGTGaa > 1:3350954/1‑49 (MQ=255) aCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCa < 1:3606780/70‑1 (MQ=255) tCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGtctc < 1:899748/50‑1 (MQ=255) tCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAAt > 1:1480719/1‑65 (MQ=255) aatttgagcctggcaacacgaggttgcattgctgaatAGGGTGAAGTCTCTcc < 1:1583264‑M1/16‑1 (MQ=255) cATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAAcc > 1:3068499/1‑70 (MQ=255) aTCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTc > 1:3310986/1‑71 (MQ=255) tCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCg > 1:952456/1‑71 (MQ=255) cGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCgt > 1:3125244/1‑71 (MQ=255) gCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCgt < 1:1688247/70‑1 (MQ=255) tttGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGtctct > 1:2710648/1‑43 (MQ=255) tttGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTcc > 1:2071560/1‑45 (MQ=255) ttGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGc > 1:2518048/1‑71 (MQ=255) ctggcaacacgaggttgcattgctgaatAGGGTGAAGtctc < 1:1830961‑M1/13‑1 (MQ=255) tgtgATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGtttc < 1:3515517/70‑3 (MQ=255) tgATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCa < 1:3370759/70‑1 (MQ=255) tgATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCa < 1:89242/70‑1 (MQ=255) gATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAgg > 1:1860296/1‑71 (MQ=255) gCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCa < 1:454182/71‑1 (MQ=255) ccATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAAt > 1:3415576/1‑70 (MQ=255) ccATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAAt > 1:2751456/1‑70 (MQ=255) cATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCgt < 1:852316/53‑1 (MQ=255) cATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCa < 1:663868/66‑1 (MQ=255) cATTGACTTCTGTAGAGGGGGAAGGCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCa < 1:1062266/66‑1 (MQ=255) aTTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGc < 1:1631087/39‑1 (MQ=255) aTTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTAc < 1:223838/71‑1 (MQ=255) ttGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTc > 1:146551/1‑35 (MQ=255) ttGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTAc > 1:2942280/1‑70 (MQ=255) ttGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTAc > 1:1847940/1‑70 (MQ=255) tGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTAc > 1:1054276/1‑69 (MQ=255) gACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCgtgt > 1:364876/1‑51 (MQ=255) gACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCgtgt > 1:1493235/1‑51 (MQ=255) gACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTg > 1:139924/1‑53 (MQ=255) aCTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGc < 1:1693820/35‑1 (MQ=255) aCTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGc < 1:1028114/35‑1 (MQ=255) aCTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCa < 1:2298465/61‑1 (MQ=255) cTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGc > 1:2011762/1‑70 (MQ=255) cTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCaaa > 1:2819547/1‑70 (MQ=255) tGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTAc > 1:1211978/1‑62 (MQ=255) gTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCt < 1:2197349/53‑1 (MQ=255) tAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATa < 1:2885192/71‑1 (MQ=255) AGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCgt > 1:3716983‑M1/1‑38 (MQ=255) | GATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATA > minE/2957535‑2957672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |