| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 957613 = | 51 (0.980) | 3 (0.070) | 3/90 | NT | 7.0% | coding (2693/2796 nt) | pqqL | predicted peptidase |
| ? | minE | 957637 = | 35 (0.770) | coding (2669/2796 nt) | pqqL | predicted peptidase | |||||
TGTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATCGAG > minE/957575‑957707 | tgtTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCatat > 1:1935926/1‑71 (MQ=255) aaCATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGa < 1:52451/70‑1 (MQ=255) aCATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAAt < 1:1979973/71‑1 (MQ=255) cATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAAt > 1:3374844/1‑70 (MQ=255) aTTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATaa < 1:2962759/71‑1 (MQ=255) aTTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATaa < 1:3735992/71‑1 (MQ=255) tACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACt < 1:401965/69‑1 (MQ=255) ccGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTAtt < 1:1157115/70‑1 (MQ=255) ccGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTAtt < 1:681145/70‑1 (MQ=255) gTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTAc < 1:3272556/71‑1 (MQ=255) cATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACaa > 1:2580715/1‑71 (MQ=255) cATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACaa > 1:3135054/1‑71 (MQ=255) aTTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACt < 1:1872733/62‑1 (MQ=255) aTTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACaa < 1:1100099/70‑1 (MQ=255) aTTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACaa < 1:2178685/70‑1 (MQ=255) aTTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACaa < 1:717242/70‑1 (MQ=255) aTTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACaa < 1:1441221/70‑1 (MQ=255) aTTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACaa < 1:385746/70‑1 (MQ=255) aTTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACaa < 1:1384710/70‑1 (MQ=255) gTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAgtg > 1:2038115/1‑71 (MQ=255) gTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAgt < 1:1669390/70‑1 (MQ=255) tttCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAgtgt > 1:653566/1‑71 (MQ=255) tttCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAgtgt < 1:2522405/71‑1 (MQ=255) ttCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAAt < 1:3538756/50‑1 (MQ=255) tCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAg < 1:3076477/66‑1 (MQ=255) caacaaTTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTc < 1:3952366/70‑1 (MQ=255) aacaaTTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATaa < 1:1133419/49‑1 (MQ=255) aacaaTTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGc > 1:3116328/1‑71 (MQ=255) acaaTTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGc > 1:1012953/1‑70 (MQ=255) gCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATa > 1:890985/1‑56 (MQ=255) tcctgcagcatggactgagcaggaTCGTCATATTGaa < 1:3694331‑M2/13‑1 (MQ=255) CCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAAttgttg < 1:2357699‑M1/70‑1 (MQ=255) ctgcagcatggactgagcaggaTCGTCATATTGAATa > 1:2604336‑M2/23‑37 (MQ=255) CTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTAc > 1:3190479‑M1/1‑48 (MQ=255) CTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGaa < 1:2949720‑M1/71‑1 (MQ=255) CTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGaa > 1:610267‑M1/1‑71 (MQ=255) TGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAAc < 1:3051049‑M1/71‑1 (MQ=255) GCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACg < 1:2001824‑M1/71‑1 (MQ=255) cagcatggactgagcaggaTCGTCATATTGAATAAGACt > 1:445808‑M2/20‑39 (MQ=255) CTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTa > 1:1990194‑M1/1‑40 (MQ=255) CTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTAc < 1:1252651‑M1/45‑1 (MQ=255) tCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTa < 1:2118237/58‑1 (MQ=255) tCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTa < 1:3614863/58‑1 (MQ=255) cAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTc < 1:1083119/53‑1 (MQ=255) cAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAacgcta > 1:2969582/1‑71 (MQ=255) cATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTg < 1:3245032/71‑1 (MQ=255) aTGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAgtg < 1:3263566/44‑1 (MQ=255) aTGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAgtg < 1:1651637/44‑1 (MQ=255) tgctgcAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGtt > 1:3513179/1‑71 (MQ=255) tgctgcAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGtt > 1:2123492/1‑71 (MQ=255) ggaTCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATc < 1:468527‑M2/68‑1 (MQ=255) gaTCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAAttgttg < 1:33271‑M2/47‑1 (MQ=255) gaTCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAAttgttg < 1:767254‑M2/47‑1 (MQ=255) gaTCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGt < 1:1813647‑M2/60‑1 (MQ=255) gaTCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATc > 1:1396762‑M2/3‑70 (MQ=255) tCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATCGAg < 1:1885048/71‑1 (MQ=255) | TGTTAACATTCTCTACCGTCATTTGTTTCAACAATTGCTCCTGCTCAGTCCATGCTGCAGGATCGTCATATTGAATAAGACTATTTACAATAGTGTTCGCTAATTGTTGAACGCTACGCTGTTGGATATCGAG > minE/957575‑957707 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |