| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 984524 | 41 (0.790) | 3 (0.070) | 3/86 | NT | 6.7% | coding (625/711 nt) | ynfC | hypothetical protein |
| ? | minE | = 984538 | 49 (1.120) | coding (611/711 nt) | ynfC | hypothetical protein | |||||
AACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCAGTAAAGTAACCGCTGTGTA > minE/984471‑984608 | aaCCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTga > 1:814404‑M2/1‑68 (MQ=255) ccGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTgactg < 1:2366501‑M2/70‑6 (MQ=255) cGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTgactgt < 1:2704703‑M2/70‑7 (MQ=255) gTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTgactgtca < 1:2442438‑M2/71‑9 (MQ=255) aCGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATAtt > 1:2625191/1‑70 (MQ=255) cggcggGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTca > 1:418353/1‑71 (MQ=255) cggcggGTTTTACTCCTTCATCAACAATGATTACCTGACAGTCCACCGGATTAGCGTGACTGTCATATTca < 1:840997/71‑1 (MQ=255) ggcggGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTcac < 1:3036361/71‑1 (MQ=255) ggTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGct < 1:1285290/71‑1 (MQ=255) tttACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGctc > 1:484703/1‑69 (MQ=255) tttACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTg > 1:3191213/1‑71 (MQ=255) ttACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTg < 1:3340130/70‑1 (MQ=255) ttACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGt > 1:2958928/1‑71 (MQ=255) ttACTCCTTCATCAA‑AATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGtt > 1:301960/1‑71 (MQ=255) tCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTa > 1:8529/1‑71 (MQ=255) tCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTa > 1:247638/1‑71 (MQ=255) cTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACa > 1:2332207/1‑71 (MQ=255) cTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACa > 1:1499246/1‑71 (MQ=255) ttCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATAtt < 1:3935991/53‑1 (MQ=255) tcatcaACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGttt > 1:2264692/1‑65 (MQ=255) tcatcaACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGttt > 1:2386843/1‑65 (MQ=255) tcatcaACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACAt > 1:2450392/1‑70 (MQ=255) tcaACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTAGATTAcc < 1:3242/71‑1 (MQ=255) aacaaTGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCaa > 1:3877302/1‑71 (MQ=255) acaaTGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAAc < 1:3538809/71‑1 (MQ=255) caaTGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACa > 1:574243/1‑62 (MQ=255) aaTGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAAccc < 1:799011/71‑1 (MQ=255) aaTGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAAccc < 1:3179971/71‑1 (MQ=255) aaTGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAAccc < 1:3485356/71‑1 (MQ=255) aaTGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAAccc > 1:3923673/1‑71 (MQ=255) aTTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTg < 1:52227/71‑1 (MQ=255) aGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGctct < 1:2618583/46‑1 (MQ=255) aGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTa > 1:3152634/1‑57 (MQ=255) gCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGatta < 1:3030533/71‑1 (MQ=255) cTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGattat < 1:3944640/71‑1 (MQ=255) tGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGtt > 1:3082852/1‑64 (MQ=255) tGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGtt > 1:1132123/1‑64 (MQ=255) aCAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACAtt < 1:996955/51‑1 (MQ=255) aCAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGattatt > 1:2892394/1‑69 (MQ=255) aCAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGa < 1:562282/64‑1 (MQ=255) cAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGa > 1:3321814/1‑63 (MQ=255) aGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACAt > 1:682099/1‑48 (MQ=255) aGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCagt < 1:2012096/71‑1 (MQ=255) gTCCACCGGATTAGCGTgactgtcagctaatcattgttgatgaaggagtaaaacccgccgtcgaacgggtt > 1:2298391‑M2/1‑17 (MQ=255) gTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCAGTTTTACATTACCAACCCGTTGATTATTCagta < 1:3234566/71‑1 (MQ=255) tCCACCGGATTAGCGTGACTGTCATATTCACAGctct < 1:400727/37‑1 (MQ=255) tCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCagtaa < 1:3356808/71‑1 (MQ=255) cACCGGATTAGCGTgactgtcagctaatcattgttgatgaaggagtaaaacccgccgtcgaacgggtttac > 1:2046188‑M2/1‑14 (MQ=255) cACCGGATTAGCGTgactgtcagctaatcattgttgatgaaggagtaaaacccgccgtcgaacgggttta > 1:1630820‑M2/1‑14 (MQ=255) aCCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCagtaaagt < 1:1952385/71‑1 (MQ=255) ccGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCagtaaagt > 1:120066/1‑70 (MQ=255) ccGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCagtaaagt > 1:3474058/1‑70 (MQ=255) ggATTAGCGTGACTGTCATATTCACAGCTCTGTTTTa > 1:1017177/1‑37 (MQ=255) ggATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGtt < 1:2164622/52‑1 (MQ=255) gATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACa > 1:1107488/1‑38 (MQ=255) gATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCAGTAAAGTAAcc < 1:3347841/71‑1 (MQ=255) gATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCAGTAAAGTAAcc > 1:2962070/1‑71 (MQ=255) ttAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCAGTAAAGTAACCGc > 1:107717/1‑71 (MQ=255) aGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCagtaaagt > 1:2844520/1‑63 (MQ=255) aGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCAGTAAAGTAACCGCtg > 1:439946/1‑71 (MQ=255) aGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCAGTAAAGTAACCGCt < 1:1583578/70‑1 (MQ=255) gCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCagtaaagta < 1:791924/63‑1 (MQ=255) cGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCAGTAAAGTAACCGCtgtg < 1:2073511/71‑1 (MQ=255) tGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCAGTAAAGTAACCGCTGTGTa < 1:2187212/71‑1 (MQ=255) tGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCAGTAAAGTAACCGCTGTGTa < 1:373343/71‑1 (MQ=255) tGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCAGTAAAGTAACCGCTGTGTa < 1:2343630/71‑1 (MQ=255) | AACCCGTTCGACGGCGGGTTTTACTCCTTCATCAACAATGATTAGCTGACAGTCCACCGGATTAGCGTGACTGTCATATTCACAGCTCTGTTTTACATTACCAACCCGTTGATTATTCAGTAAAGTAACCGCTGTGTA > minE/984471‑984608 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |