| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1098680 = | 42 (0.810) | 4 (0.090) | 3/92 | NT | 9.5% | intergenic (+18/‑82) | ydiL/ydiM | conserved hypothetical protein/predicted transporter |
| ? | minE | 1098700 = | 38 (0.810) | intergenic (+38/‑62) | ydiL/ydiM | conserved hypothetical protein/predicted transporter | |||||
ATGCACACGATCTGGAGCGGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGAACCTATGAAAAA > minE/1098634‑1098769 | aggtgctttaaaaagtgaagcgatgttgtgtcagcatccgttcattATTGTCGTTGTTACAACaata < 1:3469114‑M1/21‑1 (MQ=255) tGCACACGATCTGGAGCGGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGaa > 1:2102273/1‑71 (MQ=255) gCACACGATCTGGAGCGGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGaa < 1:369475/70‑1 (MQ=255) acGATCTGGAGCGGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGAt > 1:3671469/1‑71 (MQ=255) acGATCTGGAGCGGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGAt > 1:2252388/1‑71 (MQ=255) cGATCTGGAGCGGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATg > 1:929969/1‑71 (MQ=255) cGATCTGGAGCGGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATg > 1:889609/1‑71 (MQ=255) cTGGAGCTGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGa > 1:2835241/1‑71 (MQ=255) gtgaagcgatgttgtgtcagcatccgttcattATTGTCGTTGTTACAACaataat < 1:3840280‑M1/23‑1 (MQ=255) gtgaagcgatgttgtgtcagcatccgttcattATTGTCGTTGTTACAACaataat < 1:282008‑M1/23‑1 (MQ=255) gAGCGGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATg > 1:328234/1‑64 (MQ=255) gAGCGGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATg > 1:2940009/1‑64 (MQ=255) aGCGGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGacac > 1:2161497/1‑70 (MQ=255) gCGGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACg > 1:570572/1‑58 (MQ=255) ttGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACAt < 1:1226884/68‑1 (MQ=255) tGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCt > 1:2240035/1‑71 (MQ=255) ttAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGaca < 1:3203260/59‑1 (MQ=255) tAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCa > 1:2472547/1‑71 (MQ=255) aaTTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATg > 1:2215155/1‑51 (MQ=255) aaTTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCt < 1:1691806/53‑1 (MQ=255) aTTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACt > 1:948960/1‑71 (MQ=255) aTTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACt > 1:1880655/1‑71 (MQ=255) tttttCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACtt < 1:387615/71‑1 (MQ=255) ttttCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACttt > 1:3368906/1‑71 (MQ=255) tttCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACttt < 1:1691273/70‑1 (MQ=255) ccACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTa < 1:991636/70‑1 (MQ=255) cacaGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATc < 1:1708515/56‑1 (MQ=255) cacaGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATc < 1:3117654/56‑1 (MQ=255) caGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGc > 1:828298/1‑56 (MQ=255) caGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGc > 1:1544485/1‑56 (MQ=255) aGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCa > 1:892699/1‑71 (MQ=255) gAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCAc < 1:211597/71‑1 (MQ=255) aaaGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACacaaca > 1:3087063/1‑49 (MQ=255) aaaGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACacaaca > 1:2502853/1‑49 (MQ=255) aaaGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCAc > 1:2781277/1‑70 (MQ=255) aaGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCt < 1:1793874/71‑1 (MQ=255) aGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCtt > 1:1481942/1‑71 (MQ=255) attattgttgtaacaacgacaatAATGAACGGATGCTGACACAACATCGCTTCAc < 1:3840280‑M2/32‑1 (MQ=255) attattgttgtaacaacgacaatAATGAACGGATGCTGACACAACATCGCTTCAc < 1:282008‑M2/32‑1 (MQ=255) tattgttgtaacaacgacaatAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCt < 1:3469114‑M2/46‑1 (MQ=255) GTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAg < 1:2129584‑M1/71‑1 (MQ=255) gttgttACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAg < 1:3002649/71‑1 (MQ=255) gtaacaacgacaatAATGAACGGATGCTGACACAACATCg < 1:3574670‑M2/26‑1 (MQ=255) tgttACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGaa > 1:3395460/1‑71 (MQ=255) tgttACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGaa > 1:2929697/1‑71 (MQ=255) gttACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGaa < 1:2758811/70‑1 (MQ=255) ttACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGAAcc < 1:259818/71‑1 (MQ=255) acaacaATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGc > 1:1946135/1‑50 (MQ=255) acaacaATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGAACCTa > 1:3721369/1‑71 (MQ=255) caacaaTAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGa < 1:346692/65‑1 (MQ=255) caacaaTAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGa < 1:3255256/65‑1 (MQ=255) caacaaTAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGa < 1:1065216/65‑1 (MQ=255) aacaaTAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGAAcc < 1:1654665/67‑1 (MQ=255) aacaaTAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGAACCTAt > 1:880211/1‑70 (MQ=255) aacaaTAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGAACCTAt > 1:1884352/1‑70 (MQ=255) caatAATGAACGGATGCTGACACAACATCGCTTCACTTTTTa < 1:2928667‑M2/38‑1 (MQ=255) caatAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGAACCTATGa > 1:98109‑M2/5‑70 (MQ=255) aatAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCAcc > 1:2927919‑M2/4‑48 (MQ=255) tAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGAACCTATGaaaaa < 1:3770646‑M2/70‑1 (MQ=255) tAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGAACCTATGaaaaa < 1:3508173‑M2/70‑1 (MQ=255) tAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGAACCTATGaaaaa < 1:538608‑M2/70‑1 (MQ=255) tAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGAACCTATGaaaaa > 1:2783440‑M2/2‑71 (MQ=255) | ATGCACACGATCTGGAGCGGCTTTGTTAATTTTTCCACAGAAAGGAATTGTCGTTGTTACAACAATAATGAACGGATGCTGACACAACATCGCTTCACTTTTTAAAGCACCTTTGCTAAGTAGAACCTATGAAAAA > minE/1098634‑1098769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |