| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2626177 = | 48 (0.930) | 3 (0.080) | 3/78 | NT | 9.6% | intergenic (+16/‑229) | ftsX/rpoH | predicted transporter subunit/RNA polymerase, sigma 32 (sigma H) factor |
| ? | minE | 2626214 = | 20 (0.500) | intergenic (+53/‑192) | ftsX/rpoH | predicted transporter subunit/RNA polymerase, sigma 32 (sigma H) factor | |||||
CACTTTACGCCTGAATAATAAAAGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTATTCACAAGCTTGCA > minE/2626144‑2626283 | cACTTTACGCCTGAATAATAAAAGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAgaga < 1:1680718/71‑1 (MQ=255) cTTTACGCCTGAATAATAAAAGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGAcc > 1:2493640/1‑71 (MQ=255) tACGCCTGAATAATAAAAGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGAcccc > 1:2731670/1‑70 (MQ=255) aCGCCTGAATAATAAAAGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCg < 1:2848330/70‑1 (MQ=255) tGAATAATAAAAGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGtt > 1:2520359/1‑67 (MQ=255) aataatAAAAGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGtctc < 1:750990/70‑1 (MQ=255) ataataAAAGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGtctc > 1:1563539/1‑69 (MQ=255) ataaAAGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTcc < 1:1262625/70‑1 (MQ=255) aaaGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCtt > 1:1475095/1‑65 (MQ=255) aaaGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTccc > 1:2655352/1‑68 (MQ=255) aaaGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCgg < 1:2583993/70‑1 (MQ=255) aGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTAt < 1:2226713/71‑1 (MQ=255) gCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTAtt < 1:3829402/71‑1 (MQ=255) gCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTAtt < 1:2114899/71‑1 (MQ=255) gCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTAtt < 1:1006203/71‑1 (MQ=255) gtgtTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTc < 1:1955629/71‑1 (MQ=255) ttATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCAtc < 1:1050677/71‑1 (MQ=255) ataCTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCAtctc > 1:3466453/1‑71 (MQ=255) taCTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCAtctc < 1:652254/70‑1 (MQ=255) taCTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATctct < 1:956992/71‑1 (MQ=255) taCTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATctct < 1:3573734/71‑1 (MQ=255) TCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATg < 1:2061973‑M1/71‑1 (MQ=255) TCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTctct > 1:182588‑M1/1‑46 (MQ=255) ccctgctacggaacccattgcagggaaagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTcaca > 1:157660‑M2/32‑71 (MQ=255) CTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACAtt < 1:2167246‑M1/71‑1 (MQ=255) GCAATGGGTTCCGTAGCTGGGAATGAGACCGCGTTGTCTCTTCCCGGTATTTCa > 1:1777262‑M1/1‑54 (MQ=255) GCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACAtttt < 1:2362324‑M1/71‑1 (MQ=255) ctacggaacccattgcagggaaagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACAtt < 1:889789‑M2/42‑1 (MQ=255) acggaacccattgcagggaaagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTtgtg > 1:3828922‑M2/25‑71 (MQ=255) aTGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTctct < 1:3324941/38‑1 (MQ=255) gggTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCAt > 1:3463703/1‑50 (MQ=255) cGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAAtt < 1:690885/70‑1 (MQ=255) cGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAAtt < 1:3585480/70‑1 (MQ=255) gTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTa > 1:2284910/1‑71 (MQ=255) gTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTa < 1:3561654/71‑1 (MQ=255) gTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTa < 1:2069752/71‑1 (MQ=255) tAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTAt < 1:2194867/71‑1 (MQ=255) tAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTAt < 1:321134/71‑1 (MQ=255) agggaaagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTATTca > 1:3114859‑M2/11‑70 (MQ=255) gggaaagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTtgt < 1:2833716‑M2/46‑1 (MQ=255) ggaaagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACAtttt < 1:1468357‑M2/44‑1 (MQ=255) ggaaagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAAtt < 1:766562‑M2/54‑1 (MQ=255) gaaagagA‑CCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTATTCACAAGc < 1:1051832‑M2/64‑1 (MQ=255) aaagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACAtt < 1:3551471‑M2/42‑1 (MQ=255) aaagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACAtt < 1:927048‑M2/42‑1 (MQ=255) aaagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTAt < 1:3464751‑M2/57‑1 (MQ=255) aaagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTATTCACAAGc < 1:3646100‑M2/65‑1 (MQ=255) aagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTATTCACAAGCt > 1:851447‑M2/6‑71 (MQ=255) aagagACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTATTCACAAGCt > 1:3527422‑M2/6‑71 (MQ=255) agACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTATTCACAAGCTTg > 1:488331‑M2/3‑70 (MQ=255) gACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTATTCACAAGCTTGCa < 1:3296849‑M2/70‑1 (MQ=255) gACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTATTCACAAGCTTGCa < 1:939985‑M2/70‑1 (MQ=255) | CACTTTACGCCTGAATAATAAAAGCGTGTTATACTCTTTCCCTGCAATGGGTTCCGTAGCAGGGAAAGAGACCCCGTTGTCTCTTCCCGGTATTTCATCTCTATGTCACATTTTGTGCGTAATTTATTCACAAGCTTGCA > minE/2626144‑2626283 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |