| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2816610 | 57 (1.100) | 5 (0.110) | 4/90 | NT | 7.9% | coding (268/441 nt) | soxR | DNA‑binding transcriptional dual regulator, Fe‑S center for redox‑sensing |
| ? | minE | = 2816621 | 67 (1.470) | coding (279/441 nt) | soxR | DNA‑binding transcriptional dual regulator, Fe‑S center for redox‑sensing | |||||
GACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGAACTG > minE/2816555‑2816690 | gACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGcttt < 1:1580677‑M2/71‑5 (MQ=255) aCCATTGGTGAAGCGTTTGGCTTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGctttc > 1:2872217‑M2/1‑66 (MQ=255) cATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGt > 1:3519784/1‑71 (MQ=255) ttGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTcc > 1:355341/1‑71 (MQ=255) ttGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTcc > 1:802293/1‑71 (MQ=255) tGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTcc > 1:2483295/1‑70 (MQ=255) gTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCaa < 1:1888480/71‑1 (MQ=255) tGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAAt > 1:2759425/1‑71 (MQ=255) tGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAAt < 1:2154397/71‑1 (MQ=255) aaGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCaa > 1:787224/1‑68 (MQ=255) aaGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCaa > 1:3274139/1‑68 (MQ=255) aaGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCaa > 1:1137630/1‑68 (MQ=255) aaGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATgg > 1:3266376/1‑71 (MQ=255) gCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGct > 1:3550570‑M2/1‑54 (MQ=255) gCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATggtc > 1:274018/1‑69 (MQ=255) cGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCga < 1:634407/71‑1 (MQ=255) cGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGACCCAATGGCg > 1:2284636/1‑70 (MQ=255) tttGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCgag > 1:175578/1‑70 (MQ=255) ggCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGagaa > 1:390990/1‑69 (MQ=255) gCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAagag < 1:657555/71‑1 (MQ=255) cGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGt < 1:3938197/71‑1 (MQ=255) tgtTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTg > 1:1877045/1‑71 (MQ=255) tgtTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTg < 1:2259257/71‑1 (MQ=255) gtTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTg > 1:2156103/1‑70 (MQ=255) ttGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTgg < 1:796236/70‑1 (MQ=255) gCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAagag < 1:1473035/64‑1 (MQ=255) gCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGAt < 1:2487882/70‑1 (MQ=255) gCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGAt < 1:3581820/70‑1 (MQ=255) gCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGAt < 1:2197498/70‑1 (MQ=255) cccGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGAt > 1:337519/1‑69 (MQ=255) cccGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg < 1:3605859/71‑1 (MQ=255) ccGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAg < 1:1376108/38‑1 (MQ=255) ccGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGc < 1:888897‑M2/39‑2 (MQ=255) cGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAAt > 1:2557784/1‑50 (MQ=255) cGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCgag < 1:1103113/56‑1 (MQ=255) cGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCgg > 1:112364/1‑70 (MQ=255) gAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGct < 1:736534‑M2/38‑3 (MQ=255) gAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGgc > 1:2240206/1‑70 (MQ=255) gAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGgc > 1:477743/1‑70 (MQ=255) aaGGGCATACGTTAAGTGCGAAAGAGTGGAAACAg > 1:2424699/1‑35 (MQ=255) aaGGGCATACGTTAAGTGCGAAAGAGTGGAAACAg > 1:1422926/1‑35 (MQ=255) aaGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGgcg < 1:1609977/70‑1 (MQ=255) aGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCa > 1:2738157/1‑71 (MQ=255) aGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCa < 1:1149622/71‑1 (MQ=255) gggCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCAt < 1:2534788/71‑1 (MQ=255) gCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCgag < 1:3803961/50‑1 (MQ=255) cATACGTTAAGTGCTAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCa > 1:2396405/1‑71 (MQ=255) tACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATa > 1:2458132/1‑71 (MQ=255) aCGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGtt > 1:3562431/1‑53 (MQ=255) cGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATAc < 1:3306243/70‑1 (MQ=255) gTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCt < 1:1671601/71‑1 (MQ=255) gTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCt < 1:678301/71‑1 (MQ=255) tAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCTCATTCATACCt > 1:47204/1‑69 (MQ=255) aaGTGCGAAATAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg < 1:990338/54‑1 (MQ=255) aaGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTa < 1:1866215/70‑1 (MQ=255) cGAAAGAGTGGAAACAGctttcgcacttaacgtatgcccttcgggcaacacgccaaacgct > 1:1559742‑M2/1‑17 (MQ=255) cGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAagag < 1:168774/41‑1 (MQ=255) cGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGgc < 1:1197102/70‑1 (MQ=255) gAAAGAGTGGAAACAGctttcgcacttaacgtatgcccttcgggcaacacgccaaacgcttcaccaatggt < 1:405409‑M2/71‑56 (MQ=255) gAAAGAGTGGAAACAGCTTTCGTCCCAATGCCGAGAAGAGTTGGATCgg < 1:3664123/49‑1 (MQ=255) gAAAGAGTGGAAACAGCTTTCGTCCCAATGCCGAGAAGAGTTGGATCgg < 1:3659518/49‑1 (MQ=255) aaaGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCt > 1:1211542/1‑71 (MQ=255) aaaGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCt > 1:2676450/1‑71 (MQ=255) aaGAGTGTAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTg > 1:1503731/1‑71 (MQ=255) aaGAGTGGAAACAGctttcgcacttaacgtatgcccttcgggcaacacgccaaacgcttcaccaatggtcg < 1:3755086‑M2/71‑58 (MQ=255) aaGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTgg < 1:2033480/42‑1 (MQ=255) aaGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGAt > 1:2504361/1‑44 (MQ=255) aaGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCAt < 1:3510337/56‑1 (MQ=255) aaGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTg < 1:1724593/71‑1 (MQ=255) aaGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTg > 1:3219254/1‑71 (MQ=255) aaGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTACTGGCGCTg > 1:3200563/1‑71 (MQ=255) agagTGGAAACAGctttcgtacttaacgtatgcccttcgg < 1:3791874‑M2/40‑28 (MQ=255) agagTGGAAACAGctttcgcacttaacgtatgcccttcgggcaacacgccaaac < 1:1860387‑M2/54‑42 (MQ=255) agagTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGc < 1:2740754/71‑1 (MQ=255) gagTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTg < 1:1693775/63‑1 (MQ=255) agTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg > 1:112780/1‑43 (MQ=255) agTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCg < 1:3135922/70‑1 (MQ=255) agTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGt < 1:2777141/71‑1 (MQ=255) agTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGt > 1:3042460/1‑71 (MQ=255) agTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGt < 1:2287524/71‑1 (MQ=255) gAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAg > 1:1723233/1‑56 (MQ=255) gAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGAc > 1:163466/1‑70 (MQ=255) gAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGAc > 1:2024200/1‑70 (MQ=255) aaaCAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGa < 1:369052/71‑1 (MQ=255) aaCAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGaa > 1:3536951/1‑71 (MQ=255) aaCAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGaa > 1:1280647/1‑71 (MQ=255) aCAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATc < 1:2661167/35‑1 (MQ=255) aCAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATc > 1:1898175/1‑35 (MQ=255) aCAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGAAc > 1:621403/1‑71 (MQ=255) aCAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGAAc > 1:2663183/1‑71 (MQ=255) aCAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGAAc > 1:1496365/1‑71 (MQ=255) aCAGCTTTCGT‑CCAATGGCGAGAAGAGTTGGATCGGCGCATTCATagc > 1:2058837/1‑46 (MQ=255) aGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGAACTg < 1:475506/71‑1 (MQ=255) aGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGAACTg > 1:1438072/1‑71 (MQ=255) | GACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGAACTG > minE/2816555‑2816690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |