| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2962065 | 42 (0.810) | 4 (0.080) | 3/96 | NT | 8.5% | coding (1291/1551 nt) | yjjI | conserved hypothetical protein |
| ? | minE | = 2962083 | 47 (0.960) | coding (1273/1551 nt) | yjjI | conserved hypothetical protein | |||||
TTCCGGCTTTAAAGGCACCGAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGCAGATGGGTGATC > minE/2962014‑2962153 | ttCCGGCTTTAAAGGCACCGAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGc > 1:2667679‑M2/1‑70 (MQ=255)ttCCGGCTTTAAAGGCACCGAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGc > 1:1716538‑M2/1‑70 (MQ=255) cGGCTTTAAAGGCACCGAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGcgt > 1:2119198‑M2/1‑67 (MQ=255) aaaGGCACCGAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATg < 1:364011/70‑1 (MQ=255) aaaGGCACCGAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGt > 1:2689022/1‑71 (MQ=255) aaGGCACCGAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGt < 1:3610442/70‑1 (MQ=255) aaGGCACCGAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTc < 1:1478426/71‑1 (MQ=255) cACCGAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTg < 1:1169469/71‑1 (MQ=255) cACCGAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTg < 1:1802071/71‑1 (MQ=255) ccGAGGCAAAGCTGTACCTGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGGCAGAATg < 1:2082327/63‑1 (MQ=255) cGAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATg > 1:2093163/1‑71 (MQ=255) gAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGa > 1:3128217/1‑58 (MQ=255) aGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCg < 1:1040903/63‑1 (MQ=255) aGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCg < 1:2165632/63‑1 (MQ=255) cAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGa < 1:1299491/71‑1 (MQ=255) aaaGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGaa > 1:3734324/1‑71 (MQ=255) aGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATg > 1:2089955/1‑54 (MQ=255) aGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTc > 1:1878158/1‑56 (MQ=255) aGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTc > 1:468171/1‑56 (MQ=255) aGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGaat > 1:1708198/1‑70 (MQ=255) aGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGaat > 1:3475097/1‑70 (MQ=255) gCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGaataa > 1:2369717/1‑71 (MQ=255) aCCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGc < 1:1641671/52‑1 (MQ=255) ccAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAAt > 1:379537/1‑46 (MQ=255) ccAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGaataataat > 1:1579945/1‑69 (MQ=255) tGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGaa < 1:563602/41‑1 (MQ=255) tGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCat < 1:2161404/71‑1 (MQ=255) gCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGaat < 1:1870074/54‑1 (MQ=255) gCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGc > 1:2876594/1‑71 (MQ=255) cGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGc < 1:1459157/70‑1 (MQ=255) cGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGc < 1:3427741/70‑1 (MQ=255) cGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCg > 1:1410940/1‑71 (MQ=255) cGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCg > 1:2021902/1‑71 (MQ=255) cGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCg > 1:1640884/1‑71 (MQ=255) ttACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCgg < 1:93089/46‑1 (MQ=255) aCGTTTGATGGTTTCGTCGAGcgtaacccgcaggcactggtacagctttgcctcggtgccttt > 1:557087‑M2/1‑21 (MQ=255) aCGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGaataataa > 1:128115/1‑52 (MQ=255) aCGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGaataataa > 1:158545/1‑52 (MQ=255) cGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGa < 1:2852842/70‑1 (MQ=255) gTTTGATGGTTTCGTCGAGcgtaacccgcaggcactggtacagctttgcctcggtgcctttaa < 1:727983‑M2/63‑45 (MQ=255) gTTTGATGGTTTCGTCGAGcgtaacccgcaggcactggtacagctttgcctcggt > 1:1589397‑M2/1‑19 (MQ=255) gTTTGATGGTTTCGTCGAGcgtaacccgcaggcactggtacagctttgcctcggt > 1:202485‑M2/1‑19 (MQ=255) gTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGa > 1:309851/1‑69 (MQ=255) gTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACa < 1:1658117/71‑1 (MQ=255) ttGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGt > 1:343005/1‑71 (MQ=255) ttGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGt > 1:19199/1‑71 (MQ=255) ttGATGGTTTCGTCGAGCGGCAGAATGTCGCTGATGc < 1:1041068/37‑1 (MQ=255) tGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGt < 1:3246968/70‑1 (MQ=255) aTGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGttt < 1:3864838/70‑1 (MQ=255) tGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGc < 1:87059/71‑1 (MQ=255) gTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGCAg < 1:3019827/71‑1 (MQ=255) ttCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGtt < 1:3321203/64‑1 (MQ=255) tcgtcgAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGCAg > 1:363799/1‑68 (MQ=255) tcgtcgAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGCAg > 1:742678/1‑68 (MQ=255) cgtcgAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGCAGATgg > 1:395831/1‑71 (MQ=255) gtcgAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGCAGATggg > 1:2669958/1‑71 (MQ=255) tcgAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGCAGATGGGt < 1:474704/71‑1 (MQ=255) cgAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCg > 1:2709045/1‑48 (MQ=255) cgAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGCAGATGGGt > 1:2958492/1‑70 (MQ=255) gAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGCAGATGGGTGa > 1:3605266/1‑71 (MQ=255) aGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGCAGATGGGTGAt > 1:1042761/1‑71 (MQ=255) gCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGCAGATGGGTGATc > 1:1190284/1‑71 (MQ=255) | TTCCGGCTTTAAAGGCACCGAGGCAAAGCTGTACCAGTGCCTGCGGGTTACGTTTGATGGTTTCGTCGAGCGTCAGAATGTCGCTGATGCCGGAATAATAATAAGCATGATGCGGGGCGACAGTTTGCAGATGGGTGATC > minE/2962014‑2962153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |