Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 327,386 C→T 59.4% S288F (TCC→TTC)  hemH → ferrochelatase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE327,3860CT59.4% 14.5 / 33.1 32S288F (TCC→TTC) hemHferrochelatase
Reads supporting (aligned to +/- strand):  ref base C (5/8);  new base T (9/10);  total (14/18)
Fisher's exact test for biased strand distribution p-value = 7.25e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTCCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGCCACGCCGGAACATATCGA  >  minE/327317‑327452
                                                                     |                                                                  
tgtgCCCGGGCTTTGCTGCGGATTGTCTGGAGACGATGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTcc                                                                   >  1:324227/1‑71 (MQ=255)
        ggCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCt                                                                 <  1:3391055/65‑1 (MQ=255)
        ggCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGc                                                           >  1:1525595/1‑71 (MQ=255)
           tttGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCcg                                                         >  1:2089103/1‑70 (MQ=255)
             tgctgcGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTCCCTCGGTGCcggcg                                                      >  1:1359148/1‑71 (MQ=255)
             tgctgcGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTCCCTCGGTGCcgg                                                        <  1:3932999/69‑1 (MQ=255)
                   ggATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGaaaa                                                <  1:1229002/71‑1 (MQ=255)
                     aTTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGaaaaaa                                              <  1:2799900/71‑1 (MQ=255)
                     aTTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTCCCTCGGTGCCGGCGGGaaaaaa                                              <  1:950066/71‑1 (MQ=255)
                     aTTGTCTGGAGACGCTGGAAGAGATTCCGAGCAAAACCGTGAGGTCTCCCTCGGTGCCGGCGGGAAAAAat                                             <  1:2692643/71‑1 (MQ=255)
                        gTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAata                                            <  1:53508/70‑1 (MQ=255)
                           tGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGa                                         <  1:595411/70‑1 (MQ=255)
                             gagaCGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTtcc                                                                  <  1:3595214/43‑1 (MQ=255)
                             gagaCGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTCCCTCGGTGCCGGCGGGAAAAAATATGAata                                      >  1:3509793/1‑71 (MQ=255)
                              agaCGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAatat                                     <  1:2615197/71‑1 (MQ=255)
                                  gCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAATATATTc                                 <  1:1349961/71‑1 (MQ=255)
                                  gCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTCCCTCGGTGCCGGCGGGAAAAAATATGAATATATTc                                 <  1:1629149/71‑1 (MQ=255)
                                    tGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTCCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCg                               >  1:3365178/1‑71 (MQ=255)
                                      gAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGgc                             >  1:2109379/1‑71 (MQ=255)
                                       aaGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGgc                             >  1:3360174/1‑70 (MQ=255)
                                        agagATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAat                                       >  1:1071327/1‑59 (MQ=255)
                                          agaTTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCg                               <  1:962987/65‑1 (MQ=255)
                                           gaTTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTa                        <  1:430985/71‑1 (MQ=255)
                                            aTTGCCGAGCAAAACCGTGAGGTCTCCCTCGGTGCCGGCGGGAAAAAATATGaa                                        <  1:2747939/54‑1 (MQ=255)
                                              tGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAatata                                    >  1:314510/1‑56 (MQ=255)
                                                ccGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGc                    >  1:1268177/1‑70 (MQ=255)
                                                    gCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGCCACGc               >  1:3176086/1‑71 (MQ=255)
                                                     cAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGCCACGcc              <  1:999103/71‑1 (MQ=255)
                                                      aaaaCCGTGAGGTCTCCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGCCACGcc              <  1:1596167/70‑1 (MQ=255)
                                                       aaaCCGTGAGGTCTCCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGCCACGCCg             >  1:160135/1‑70 (MQ=255)
                                                         aCCGTGAGGTCTCCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGc                    >  1:478958/1‑61 (MQ=255)
                                                           cGTGAGGTCTCCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGCCACGCCGGAACa        <  1:132399/71‑1 (MQ=255)
                                                             tGAGGTCTCCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGCCACGCCGGAACata      <  1:3430348/71‑1 (MQ=255)
                                                               aGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGCCACGCCGGaa          >  1:519257/1‑65 (MQ=255)
                                                                  tctcCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGCCACGCCGGAACATATCGa  >  1:3843990/1‑70 (MQ=255)
                                                                     |                                                                  
TGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTCCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGCCACGCCGGAACATATCGA  >  minE/327317‑327452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: