Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 608,030 A→C 8.1% S742A (TCG→GCG) ‡ pflB ← pyruvate formate lyase I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE608,0300AC 8.1% 151.8 / 8.2 62S742A (TCG→GCG) ‡pflBpyruvate formate lyase I
Reads supporting (aligned to +/- strand):  ref base A (30/27);  new base C (2/3);  total (32/30)
Fisher's exact test for biased strand distribution p-value = 6.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01

GTCAAATCTAATTACATAGATTGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGGGTTTTCCAT  >  minE/607960‑608096
                                                                      |                                                                  
gTCAAATCTAATTACATAGATTGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGa                                                                    <  1:1089431/71‑1 (MQ=255)
   aaaTCTAATTACATAGATTGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGtt                                                                 >  1:662524/1‑71 (MQ=255)
        tAATTACATAGATTGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGaa                                                              >  1:2061563/1‑69 (MQ=255)
          aTTACATAGATTGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGaaa                                                             <  1:3017429/68‑1 (MQ=255)
           ttACATAGATTGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTa                                                         >  1:34797/1‑71 (MQ=255)
           ttACATAGATTGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTa                                                         <  1:2432002/71‑1 (MQ=255)
             aCATAGATTGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTAc                                                        <  1:1389128/70‑1 (MQ=255)
              cATAGATTGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTg                                                      >  1:1887533/1‑71 (MQ=255)
               aTAGATTGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGc                                                     >  1:3546040/1‑71 (MQ=255)
                tAGATTGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCg                                                    <  1:616304/71‑1 (MQ=255)
                     tGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGaaa                                                             >  1:3509632/1‑57 (MQ=255)
                     tGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAga                                                >  1:2313334/1‑69 (MQ=255)
                     tGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGc                                                >  1:2898512/1‑70 (MQ=255)
                      gAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAAc                                                            >  1:1709618/1‑57 (MQ=255)
                      gAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAAc                                                            >  1:2602647/1‑57 (MQ=255)
                       aGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTTTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCa                                              <  1:2450779/70‑1 (MQ=255)
                       aGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTTTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCa                                              <  1:2455529/70‑1 (MQ=255)
                        gtaaaGGTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCACGGCGTAGCCAGa                                            <  1:3531908/68‑1 (MQ=255)
                        gTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGcc                                               <  1:3339913/68‑1 (MQ=255)
                         tGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGa                                            >  1:3822705/1‑70 (MQ=255)
                           aaGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGaaa                                                             <  1:3075954/51‑1 (MQ=255)
                           aaGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATac                                         <  1:2826648/71‑1 (MQ=255)
                            aGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATac                                         <  1:3332902/70‑1 (MQ=255)
                              gTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCACGGCGTAGCCAGAGACACg                                      <  1:2535925/71‑1 (MQ=255)
                              gTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCACGGCGTAGCCAGAGACACg                                      <  1:3737148/71‑1 (MQ=255)
                              gTACGTGAAATAACATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCACGGCGTAGCCAGAGACACg                                      >  1:2028385/1‑71 (MQ=255)
                              gTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGa                                                                    <  1:1477452/41‑1 (MQ=255)
                               tACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACgg                                     <  1:3117734/71‑1 (MQ=255)
                               tACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACgg                                     <  1:283522/71‑1 (MQ=255)
                                 cGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGa                                    <  1:2488753/70‑1 (MQ=255)
                                 cGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGa                                    <  1:827193/70‑1 (MQ=255)
                                  gAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAg                                                                   >  1:1576436/1‑38 (MQ=255)
                                  gAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGAt                                   >  1:591593/1‑70 (MQ=255)
                                    gaaataaCATCCTGTTGCTGTTCACGGGTCAGTGCGTTGAAGCGCACGGCGTAGCCAGAGACACGGATTGt                                >  1:1494929/3‑71 (MQ=255)
                                    gTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGt                                >  1:964003/1‑71 (MQ=255)
                                    gTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGt                                >  1:580131/1‑71 (MQ=255)
                                     taataaCGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTg                                                                <  1:2649351/38‑1 (MQ=255)
                                     taataaCGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTg                                                                <  1:3178103/38‑1 (MQ=255)
                                     taataaCGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGt                                >  1:2108558/1‑70 (MQ=255)
                                      aataaCGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATaca                                        >  1:2941795/1‑61 (MQ=255)
                                       ataaCGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAg                             >  1:1002818/1‑71 (MQ=255)
                                       ataaCGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAg                             >  1:1282906/1‑71 (MQ=255)
                                        taaCGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCg                                                    <  1:3021267/47‑1 (MQ=255)
                                          aCGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCt                           <  1:2694977/70‑1 (MQ=255)
                                          aCGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCt                           <  1:2502981/70‑1 (MQ=255)
                                          aCGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCt                           <  1:264757/70‑1 (MQ=255)
                                            gTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATaca                                        >  1:2011968/1‑55 (MQ=255)
                                              ccTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACg                                      <  1:705950/55‑1 (MQ=255)
                                              ccTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGCGGa                      >  1:145123/1‑71 (MQ=255)
                                               ctgctgctgTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGCGGa                      <  1:910165/70‑1 (MQ=255)
                                                 gctgctgTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGa                                            >  1:33633/1‑46 (MQ=255)
                                                   tgctgTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGCGGATAttt                 >  1:3792193/1‑71 (MQ=255)
                                                   tgctgTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGCGGATAttt                 >  1:1300684/1‑71 (MQ=255)
                                                     ctgTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATg                                  >  1:2330520/1‑52 (MQ=255)
                                                        ttCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTcc             <  1:2531698/70‑1 (MQ=255)
                                                        ttCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTcc             <  1:1404730/70‑1 (MQ=255)
                                                        ttCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTcc             <  1:2198588/70‑1 (MQ=255)
                                                             tAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGt                                >  1:3532970/1‑46 (MQ=255)
                                                             tAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGGGttt       >  1:941510/1‑71 (MQ=255)
                                                                tCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTcc             <  1:2401492/62‑1 (MQ=255)
                                                                  aGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGAt                                   >  1:2091158/1‑38 (MQ=255)
                                                                  aGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGAt                                   >  1:1210512/1‑38 (MQ=255)
                                                                  aGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGGGTTTTCCAt  >  1:1828542/1‑71 (MQ=255)
                                                                    cGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTg                          <  1:2570363/45‑1 (MQ=255)
                                                                      |                                                                  
GTCAAATCTAATTACATAGATTGAGTGAAGGTACGAGTAATAACGTCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGGGTTTTCCAT  >  minE/607960‑608096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: