Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 983,505 T→C 16.3% intergenic (+417/‑151) ydfC → / → dicB hypothetical protein/cell division inhibition protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE983,5050TC16.3% 94.7 / 11.6 43intergenic (+417/‑151)ydfC/dicBhypothetical protein/cell division inhibition protein
Reads supporting (aligned to +/- strand):  ref base T (20/16);  new base C (2/5);  total (22/21)
Fisher's exact test for biased strand distribution p-value = 2.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GACGTTTGGCGGTATCAGTTTTACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTATGGGTGGATTCTCTGTAT  >  minE/983437‑983574
                                                                    |                                                                     
gACGTTTGGCGGTATCAGTTTTACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATgtgg                                                                     >  1:2317026/1‑71 (MQ=255)
      tGGCGGTATCAGTTTTACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAAt                                                                <  1:181709/70‑1 (MQ=255)
      tGGCGGTATCAGTTTTACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATg                                                               >  1:3943719/1‑71 (MQ=255)
           gTATCAGTTTTACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGAtgtg                                                                      >  1:1075518/1‑59 (MQ=255)
           gTATCAGTTTTACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCt                                                          <  1:552185/71‑1 (MQ=255)
           gTATCAGTTTTACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCt                                                          >  1:1225726/1‑71 (MQ=255)
            tATCAGTTTTACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCt                                                          >  1:2312566/1‑70 (MQ=255)
               cAGTTTTACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAgc                                                      >  1:2105614/1‑71 (MQ=255)
                 gTTTTACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGa                                                                  <  1:3869120/57‑1 (MQ=255)
                  ttttACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATgtggtg                                                                   <  1:799446/55‑1 (MQ=255)
                   tttACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCAc                                                  >  1:2003373/1‑71 (MQ=255)
                    ttACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGaa                                                                 >  1:1981797/1‑55 (MQ=255)
                    ttACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCAcg                                                 >  1:1446336/1‑71 (MQ=255)
                    ttACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCAcg                                                 >  1:3508298/1‑71 (MQ=255)
                    ttACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCAc                                                  <  1:1242156/70‑1 (MQ=255)
                     tACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCAcg                                                 <  1:1626949/70‑1 (MQ=255)
                        tCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCgg                                              >  1:703380/1‑70 (MQ=255)
                          cGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGaa                                            >  1:1744422/1‑70 (MQ=255)
                            tGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGATTGCGGCTGTGCGCACGCGGAACa                                          <  1:3273197/70‑1 (MQ=255)
                               cTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGGACGCGGAACAGTTa                                      <  1:1872369/71‑1 (MQ=255)
                                  ctctGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTaaaa                                   >  1:2045059/1‑71 (MQ=255)
                                  ctctGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTaa                                     <  1:1253196/69‑1 (MQ=255)
                                  ctctGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTaa                                     <  1:3112833/69‑1 (MQ=255)
                                      gccgccCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCa                                >  1:2303951/1‑70 (MQ=255)
                                          cccTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCAcgc                                                <  1:3592838/50‑1 (MQ=255)
                                           ccTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCaaaaa                            >  1:3708794/1‑69 (MQ=255)
                                           ccTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCaaaaa                            >  1:2745282/1‑69 (MQ=255)
                                            cTTATTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTaa                                     <  1:2741076/59‑1 (MQ=255)
                                             tttttAAAGTGAATTTTGTGATGCGGTGAATGCGGCTAAGCGCACGTGGCACAGTTaaaa                                   <  1:2502227/60‑1 (MQ=255)
                                             tttttAAAGTGAATTTTGTCATGCGGTGAATGCGGCTAAGCGCACGTGGCACAGTTaaaa                                   <  1:1748936/60‑1 (MQ=255)
                                              ttttAAAGTGAATTTTGTGATGCGGTGAATGCGGCTAAGCGCACGTGGCACAGTTaaaagt                                 <  1:447940/61‑3 (MQ=255)
                                               tttAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGAGCACGCgg                                              >  1:3257778/1‑47 (MQ=255)
                                               tttAAAGTGAATTTTGTGATGCGGTGAATGCGGCTAAGCGCACGTggc                                             >  1:800831/1‑47 (MQ=37)
                                                 tAAAGTGAATTTTGTGATGCGGTGAATGCGGCTAAGCGCACGTGGCACAGt                                        <  1:113572/51‑1 (MQ=37)
                                                   aaGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTAt                   <  1:608316/70‑1 (MQ=255)
                                                   aaGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTAt                   <  1:368105/70‑1 (MQ=255)
                                                   aaGTGAATTTTGTGATGCGGTGAATGCGGCTAAGCGCACGTGGCACAGTTa                                      >  1:1951489/1‑51 (MQ=37)
                                                      tGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCgg                                              <  1:991038/40‑1 (MQ=255)
                                                      tGAATTTTGTGATGCGGTGAATGCGGCTAAGCGCACGTGGCACAg                                         <  1:2499119/45‑1 (MQ=25)
                                                        aaTTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTATgg                 <  1:77106/67‑1 (MQ=255)
                                                        aaTTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTATGGGTg              <  1:2978353/70‑1 (MQ=255)
                                                          ttttGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTATGGGTGGAt           >  1:3282629/1‑71 (MQ=255)
                                                            ttGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTa                    >  1:459098/1‑60 (MQ=255)
                                                              gtgATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTATGGGTGGATtctc       >  1:1177374/1‑71 (MQ=255)
                                                               tgATGTGGTGAATGCGGCTGAGCGCACGCGGAACa                                          >  1:2955667/1‑35 (MQ=255)
                                                                gATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTATGGGTg              >  1:1738694/1‑62 (MQ=255)
                                                                  tgtgGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTATGGGTGGATTCTCTGTa   <  1:1642272/71‑1 (MQ=255)
                                                                    tggtgAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTATGGGTGGATTCTCTGTAt  <  1:2617353/70‑1 (MQ=255)
                                                                    tggtgAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTATGGGTGGATTCTCTGTAt  <  1:2612737/70‑1 (MQ=255)
                                                                    |                                                                     
GACGTTTGGCGGTATCAGTTTTACTCCGTGACTGCTCTGCCGCCCTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACCAAAAACAGTGTTATGGGTGGATTCTCTGTAT  >  minE/983437‑983574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: