| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 48676 = | 40 (0.680) | 6 (0.110) | 3/92 | NT | 13.3% | coding (225/843 nt) | apaH | diadenosine tetraphosphatase |
| ? | minE | 48712 = | 42 (0.790) | coding (189/843 nt) | apaH | diadenosine tetraphosphatase | |||||
TGTGAAATCCTTAGGCGACAGCGTACGTCTGGTGCTGGGCAATCACGATCTGCATCTGCTGGCGGTATTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/48748‑48676‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccCAGCACCAGACGTACGCTGTCGCCTAAGGATTTCACATAGCGCAGAACATCCAGCGAACCCGGCCCGCGC > minE/48712‑48781 TGTGAAATCCTTAGGCGACAGCGTACGTCTGGTGCTGGGCAATCACGATCTGCATCTGCTGGCGGTATTTG > 1:1432250/1‑71TGTGAAATCCTTAGGCGACAGCGTACGTCTGGTGCTGGGCAATCACGATCTGCATCTGCTGGCGGTATTTG > 1:2248376/1‑71 TGAAATCCTTAGGCGACAGCGTACGTCTGGTGCTGGGCAATCACGATCTGCATCTGCTGGCGGTATTTGCC < 1:3243142/71‑1 TGAAATCCTTAGGCGACAGCGTACGTCTGGTGCTGGGCAATCACGATCTGCATCTGCTGGCGGTATTTGC < 1:2180290/70‑1 TGAAATCCTTAGGCGACAGCGTACGTCTGGTGCTGGGCAATCACGATCTGCATCTGCTGGCGGTATTTGC < 1:3340897/70‑1 TGAAATCCTTAGGCGACAGCGTACGTCTGGTGCTGGGCAATCACGATCTGCATCTGCTGGCGGTATTTGC < 1:3671794/70‑1 TGAAATCCTTAGGCGACAGCGTACGTCTGGTGCTGGGCAATCACGATCTGCATCTGCTGGCGGTATTTGC < 1:948802/70‑1 CAATCACGATCTGCATCTGCTGGCGGTATTTGCCCAGCACCAGACGTACGCTGTCGCCTAAGGATTTCACA > 1:1181535/1‑71 CAATCACGATCTGCATCTGCTGGCGGTATTTGCCCAGCACCAGACGTACGCTGTCGCCTAAGGATTTCACA > 1:1703816/1‑71 atTCACGATCTGCATCTGCTGGCGGTATTTGCCCAGCACCAGACG < 1:341342/43‑1 ATCACGATCTGCATCTGCTGGCGGTATTTGCCCAGCACCAGACG < 1:1704922/44‑1 CGATCTGCATCTGCTGGCGGTATTTGCCCAGCACCAGACGTACGCTGTCGCCTAAGGATTTCACATAGCGC < 1:2584876/71‑1 CGATCTGCATCTGCTGGCGGTATTTGCCCAGCACCAGACGTACGCTGTCGCCTAAGGATTTCACATAGCGC < 1:449091/71‑1 CCAGCACCAGACGTACGCTGTCGCCTAAGGATTTCACATAGCGCAGAACATCCAGCGAACCCGGCCCGCGC > 1:1782547/1‑71 CCAGCACCAGACGTACGCTGTCGCCTAAGGATTTCACATAGCGCAGAACATCCAGCGAACCCGGCCCGCG > 1:304488/1‑70 CCAGCACCAGACGTACGCTGTCGCCTAAGGATTTCACATAGCGCAGAACATCC < 1:2761261/53‑1 TGTGAAATCCTTAGGCGACAGCGTACGTCTGGTGCTGGGCAATCACGATCTGCATCTGCTGGCGGTATTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/48748‑48676‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccCAGCACCAGACGTACGCTGTCGCCTAAGGATTTCACATAGCGCAGAACATCCAGCGAACCCGGCCCGCGC > minE/48712‑48781 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |