| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 202882 = | NA (NA) | 7 (0.120) | 6/100 | NT | NA | noncoding (287/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | minE | 202909 = | NA (NA) | noncoding (314/1542 nt) | rrsH | 16S ribosomal RNA | |||||
TCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/202933‑202882‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGC > minE/202909‑202976 TCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA < 1:1026451/52‑1TCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA < 1:1944485/52‑1TCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA < 1:3517693/52‑1TCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA < 1:3177671/52‑1 AGTGTGGCTGGTCATCCTCTCAGACCAGCTACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGG > 1:3118305/1‑69 TGGCTGGTCATCCTCTCAGACCAGCTACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAG < 1:1955459/68‑1 GGCTGGTCATCCTCTCAGACCAGCTACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGG > 1:3039131/1‑64 GGCTGGTCATCCTCTCAGACCAGCTACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGG > 1:349459/1‑64 GCTGGTCATCCTCTCAGACCAGCTACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCA > 1:2202007/1‑68 GTCATCCTCTCAGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGA < 1:2913866/71‑1 CTCTCAGACCAGCTACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTG < 1:2884494/71‑1 ACACTGGAGCTGAGACACGGTCCAGACTCCTACGGGAGGCAG < 1:3545459/42‑1 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGC > 1:3678177/1‑69 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGC > 1:3316387/1‑69 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATAT > 1:2468902/1‑55 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGT > 1:2284994/1‑46 ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGT > 1:1499766/1‑46 TCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/202933‑202882‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGC > minE/202909‑202976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |