| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 202890 | NA (NA) | 8 (0.160) | 3/88 | NT | NA | noncoding (295/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | minE | = 202899 | NA (NA) | noncoding (304/1542 nt) | rrsH | 16S ribosomal RNA | |||||
TGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/202814‑202890‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggtcATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTG < minE/202899‑202830 TGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAG > 1:1052732/1‑71TGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAG > 1:3082629/1‑71TGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAG > 1:1028580/1‑71TGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAG > 1:3098051/1‑71TGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAG > 1:1926621/1‑71TGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAG > 1:1589312/1‑71TGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAG > 1:3648154/1‑71 caGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTC > 1:3445227/3‑71 ATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTC > 1:1259027/1‑68 ATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGC > 1:1622929/1‑63 ATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGC > 1:1537623/1‑63 GGGATTAGCTTGTTGGTGGGGTAACGGCTCACCAAGGCGACGATCCCTAGCTGGTCATCCTCTCAGACCAG > 1:733093/1‑71 TTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAG > 1:3043169/1‑46 AGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTG < 1:1279936/47‑1 GCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCATCCTCTCAGACCAGC < 1:3405864/65‑1 GTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGT > 1:1724406/1‑44 GTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGT > 1:976776/1‑44 GGGGTAACGGCTCACCAAGGCGACGATCCCTGGCTGGTCATCCTCTCAGACCAGCca > 1:3272173/1‑55 GGGGTAACGGCTCACCAAGGCGACGATCCCTGGCTGGTCATCCTCTCAGACCAGCca > 1:1942045/1‑55 TAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCATCCTCTCAGACCAGC < 1:1101851/51‑1 ACGGCTCACCTAGGCGACGATCCCTAGCTGGTCATCCTCTCAGACCA < 1:1850902/47‑1 GGCTCACCTAGGCGACGATCCCTGGCTGGTCATCCTCT < 1:47954/38‑1 GGCTCACCTAGGCGACGATCCCTGGCTGGTCATCCTCT < 1:1910690/38‑1 GCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATC < 1:3597845/70‑1 GCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTA > 1:3336844/1‑51 GCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTA > 1:2294371/1‑51 GCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGT < 1:2821972/42‑1 TGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAG > 1:2029630/1‑62 TGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGT < 1:989801/47‑1 TGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGT < 1:1272446/47‑1 TGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCG > 1:1127963/1‑46 TGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCG > 1:2906476/1‑46 TGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCG > 1:2166438/1‑46 TGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCG > 1:721739/1‑46 TGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCG > 1:525503/1‑46 GGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAA > 1:1959018/1‑65 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCT < 1:1605075/71‑1 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCT < 1:910852/71‑1 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCT > 1:1456908/1‑71 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCT < 1:1466478/71‑1 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCT > 1:2697512/1‑71 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCT < 1:1768691/71‑1 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCT < 1:1796277/71‑1 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCT < 1:2857099/71‑1 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCT > 1:2594900/1‑71 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTAC > 1:1480653/1‑56 CATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTG > 1:3733501/1‑71 CATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCT > 1:1329825/1‑70 CATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCG > 1:2240703/1‑42 CATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGA > 1:2014253/1‑38 TGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/202814‑202890‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggtcATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTG < minE/202899‑202830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |