New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? minE = 203668NA (NA)5 (0.100) 3/90 NT NA noncoding (1073/1542 nt) rrsH 16S ribosomal RNA
?minE = 203696 NA (NA)noncoding (1101/1542 nt) rrsH 16S ribosomal RNA

Only 100 of 108 total aligned reads displayed.

CCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/203593‑203668
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgtTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCC  <  minE/203696‑203627
                                                                                                                                                  
CCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             >  1:2309994/1‑71
CCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             >  1:3303328/1‑71
 CACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGC                                                                            >  1:1085392/1‑71
 CACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGC                                                                            <  1:3240251/71‑1
 CACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGC                                                                            <  1:3390849/71‑1
 CACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGC                                                                            <  1:1031881/71‑1
  ACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCT                                                                           >  1:790395/1‑71
  ACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCT                                                                           <  1:814982/71‑1
  ACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCT                                                                           <  1:819346/71‑1
   CGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTC                                                                          >  1:1834490/1‑71
   CGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTC                                                                          >  1:2656493/1‑71
   CGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTC                                                                          >  1:2862086/1‑71
    GGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCG                                                                         <  1:1926991/71‑1
    GGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCG                                                                         >  1:2467065/1‑71
    GGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCG                                                                         >  1:1672653/1‑71
    GGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTC                                                                          >  1:492046/1‑70
     GAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGT                                                                        >  1:3581598/1‑71
          TTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGC                                                                            <  1:794642/62‑1
          TTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             <  1:1662651/61‑1
          TTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             <  1:3598059/61‑1
           TTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCG                                                                         >  1:1383139/1‑64
           TTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             >  1:1700781/1‑60
           TTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             >  1:430785/1‑60
           TTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             >  1:2093396/1‑60
            TCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCT                                                                           >  1:1589536/1‑61
            TCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCT                                                                           >  1:3335597/1‑61
                    GAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             >  1:3160168/1‑51
                    GAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             >  1:974071/1‑51
                    GAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             >  1:1310244/1‑51
                           TGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTTGCGGGACTTAACCC                                                         >  1:720270/1‑64
                             CCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTTGCGGGACTTAACCCAACATTTCA                                                >  1:655575/1‑71
                                TCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGC                                                                            >  1:1501313/1‑40
                                  GGGAACCGTTAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTTGCGGGACTTAACCCAACATTTCACAAC                                            <  1:1418372/70‑1
                                  GGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             >  1:3203153/1‑37
                                  GGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             >  1:3246030/1‑37
                                  GGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             >  1:2647045/1‑37
                                  GGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG                                                                             >  1:2609539/1‑37
                                   GGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTTGCGGGACTTAACCCAACATTTCACAAC                                            <  1:748031/69‑1
                                     AACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTC                                                                          >  1:1749066/1‑37
                                                                      GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACATCCATGCAGCACCTGTCTCACGG       <  1:556426/71‑1
                                                                      GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGG       >  1:1153240/1‑71
                                                                      GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGG       <  1:2916518/71‑1
                                                                      GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGG       >  1:2817899/1‑71
                                                                      GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCAT                         >  1:842990/1‑53
                                                                      GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCAT                         >  1:641131/1‑53
                                                                      GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCAT                         >  1:1664694/1‑53
                                                                       CTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGT      >  1:2270706/1‑71
                                                                        taGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACG        >  1:3118814/3‑68
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT     >  1:2544208/1‑71
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT     >  1:747589/1‑71
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT     >  1:2857496/1‑71
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT     >  1:3689561/1‑71
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT     >  1:907714/1‑71
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT     >  1:939732/1‑71
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT     >  1:3153376/1‑71
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT     >  1:3726054/1‑71
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACG        >  1:489404/1‑68
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGT              <  1:711861/62‑1
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGT              <  1:2937462/62‑1
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGT              <  1:2941544/62‑1
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCT                <  1:3116863/60‑1
                                                                        TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCAT                         <  1:615236/51‑1
                                                                         CGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTC    >  1:2863321/1‑71
                                                                         CGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTC    >  1:1780096/1‑71
                                                                         CGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGT              <  1:1417084/61‑1
                                                                          cTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCAT                         <  1:303106/48‑1
                                                                          GTTGCTGGACTTAACCCAACATTTCACAACACGAGCTGACGACAG                             <  1:2020723/45‑1
                                                                          GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCC   >  1:829364/1‑71
                                                                          GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCC   >  1:824209/1‑71
                                                                          GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCC   >  1:112598/1‑71
                                                                          GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCC   >  1:3391395/1‑71
                                                                          GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTC    <  1:2144503/70‑1
                                                                          GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTC    <  1:1284839/70‑1
                                                                          GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT     <  1:336686/69‑1
                                                                          GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT     <  1:785112/69‑1
                                                                          GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT     <  1:1887702/69‑1
                                                                          GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCAAGGTT     <  1:2909301/69‑1
                                                                          GTTGCGGGACTTAACCCAACATTTCACAACACGAGCT                                     <  1:1819298/37‑1
                                                                          GTTGCGGGACTTAACCCAACATTTCACAACACGAGCT                                     <  1:1937609/37‑1
                                                                          GTTGCGGGACTTAACCCAACATCTCACGACACGAGCTGACGACAGCCATGCAGCACCTGTgtt           <  1:2603029/63‑4
                                                                          GTTGCGGGACTTAACCCAACATCTCACGACACGAGCTGACGACAGCCATGCAGCACCTGTgtt           <  1:1582428/63‑4
                                                                          GTTGCGGGACTTAACCCAAAATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCC   >  1:2051428/1‑71
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACTAGCTGACGACAGCCATGCAG                     <  1:2593781/52‑1
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCGATG                        >  1:280920/1‑49
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCC  >  1:546553/1‑71
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCC  >  1:2296707/1‑71
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCC  <  1:3307286/71‑1
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACAGTTCC   <  1:2813770/70‑1
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCA          <  1:2145854/63‑1
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCAC                  <  1:1233275/55‑1
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCAC                  <  1:606033/55‑1
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCAC                  <  1:1116397/55‑1
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATG                        >  1:270204/1‑49
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATG                        >  1:2662789/1‑49
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATG                        >  1:1119332/1‑49
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATG                        >  1:2545130/1‑49
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATG                        >  1:2149437/1‑49
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATG                        >  1:961448/1‑49
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACG                                 <  1:1144945/40‑1
                                                                           TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACG                                 <  1:1976452/40‑1
                                                                                                                                                  
CCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/203593‑203668
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgtTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCC  <  minE/203696‑203627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.