| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 203668 | NA (NA) | 5 (0.100) | 3/90 | NT | NA | noncoding (1073/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | minE | = 203696 | NA (NA) | noncoding (1101/1542 nt) | rrsH | 16S ribosomal RNA | |||||
Only 100 of 108 total aligned reads displayed.
CCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/203593‑203668‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgtTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCC < minE/203696‑203627 CCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG > 1:2309994/1‑71CCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG > 1:3303328/1‑71 CACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGC > 1:1085392/1‑71 CACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGC < 1:3240251/71‑1 CACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGC < 1:3390849/71‑1 CACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGC < 1:1031881/71‑1 ACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCT > 1:790395/1‑71 ACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCT < 1:814982/71‑1 ACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCT < 1:819346/71‑1 CGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTC > 1:1834490/1‑71 CGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTC > 1:2656493/1‑71 CGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTC > 1:2862086/1‑71 GGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCG < 1:1926991/71‑1 GGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCG > 1:2467065/1‑71 GGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCG > 1:1672653/1‑71 GGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTC > 1:492046/1‑70 GAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGT > 1:3581598/1‑71 TTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGC < 1:794642/62‑1 TTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG < 1:1662651/61‑1 TTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG < 1:3598059/61‑1 TTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCG > 1:1383139/1‑64 TTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG > 1:1700781/1‑60 TTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG > 1:430785/1‑60 TTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG > 1:2093396/1‑60 TCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCT > 1:1589536/1‑61 TCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCT > 1:3335597/1‑61 GAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG > 1:3160168/1‑51 GAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG > 1:974071/1‑51 GAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG > 1:1310244/1‑51 TGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTTGCGGGACTTAACCC > 1:720270/1‑64 CCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTTGCGGGACTTAACCCAACATTTCA > 1:655575/1‑71 TCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGC > 1:1501313/1‑40 GGGAACCGTTAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTTGCGGGACTTAACCCAACATTTCACAAC < 1:1418372/70‑1 GGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG > 1:3203153/1‑37 GGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG > 1:3246030/1‑37 GGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG > 1:2647045/1‑37 GGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG > 1:2609539/1‑37 GGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTTGCGGGACTTAACCCAACATTTCACAAC < 1:748031/69‑1 AACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTC > 1:1749066/1‑37 GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACATCCATGCAGCACCTGTCTCACGG < 1:556426/71‑1 GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGG > 1:1153240/1‑71 GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGG < 1:2916518/71‑1 GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGG > 1:2817899/1‑71 GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCAT > 1:842990/1‑53 GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCAT > 1:641131/1‑53 GCTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCAT > 1:1664694/1‑53 CTCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGT > 1:2270706/1‑71 taGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACG > 1:3118814/3‑68 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT > 1:2544208/1‑71 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT > 1:747589/1‑71 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT > 1:2857496/1‑71 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT > 1:3689561/1‑71 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT > 1:907714/1‑71 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT > 1:939732/1‑71 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT > 1:3153376/1‑71 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT > 1:3726054/1‑71 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACG > 1:489404/1‑68 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGT < 1:711861/62‑1 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGT < 1:2937462/62‑1 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGT < 1:2941544/62‑1 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCT < 1:3116863/60‑1 TCGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCAT < 1:615236/51‑1 CGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTC > 1:2863321/1‑71 CGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTC > 1:1780096/1‑71 CGTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGT < 1:1417084/61‑1 cTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCAT < 1:303106/48‑1 GTTGCTGGACTTAACCCAACATTTCACAACACGAGCTGACGACAG < 1:2020723/45‑1 GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCC > 1:829364/1‑71 GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCC > 1:824209/1‑71 GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCC > 1:112598/1‑71 GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCC > 1:3391395/1‑71 GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTC < 1:2144503/70‑1 GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTC < 1:1284839/70‑1 GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT < 1:336686/69‑1 GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT < 1:785112/69‑1 GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTT < 1:1887702/69‑1 GTTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCAAGGTT < 1:2909301/69‑1 GTTGCGGGACTTAACCCAACATTTCACAACACGAGCT < 1:1819298/37‑1 GTTGCGGGACTTAACCCAACATTTCACAACACGAGCT < 1:1937609/37‑1 GTTGCGGGACTTAACCCAACATCTCACGACACGAGCTGACGACAGCCATGCAGCACCTGTgtt < 1:2603029/63‑4 GTTGCGGGACTTAACCCAACATCTCACGACACGAGCTGACGACAGCCATGCAGCACCTGTgtt < 1:1582428/63‑4 GTTGCGGGACTTAACCCAAAATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCC > 1:2051428/1‑71 TTGCGGGACTTAACCCAACATTTCACAACACTAGCTGACGACAGCCATGCAG < 1:2593781/52‑1 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCGATG > 1:280920/1‑49 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCC > 1:546553/1‑71 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCC > 1:2296707/1‑71 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCC < 1:3307286/71‑1 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACAGTTCC < 1:2813770/70‑1 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCA < 1:2145854/63‑1 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCAC < 1:1233275/55‑1 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCAC < 1:606033/55‑1 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCAC < 1:1116397/55‑1 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATG > 1:270204/1‑49 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATG > 1:2662789/1‑49 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATG > 1:1119332/1‑49 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATG > 1:2545130/1‑49 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATG > 1:2149437/1‑49 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATG > 1:961448/1‑49 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACG < 1:1144945/40‑1 TTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACG < 1:1976452/40‑1 CCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/203593‑203668‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgtTGCGGGACTTAACCCAACATTTCACAACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCC < minE/203696‑203627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |