| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 205178 | NA (NA) | 3 (0.060) | 3/92 | NT | NA | noncoding (595/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | minE | = 205194 | NA (NA) | noncoding (611/2904 nt) | rrlH | 23S ribosomal RNA | |||||
CGTACAAGCAGTGGGAGCACGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/205106‑205178‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattcGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTAAGC < minE/205194‑205126 CGTACAAGCAGTGGGAGCACGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATAT > 1:720677/1‑71CGTACAAGCAGTGGGAGCACGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATAT > 1:1221300/1‑71CGTACAAGCAGTGGGAGCACGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATA > 1:394286/1‑70CGTACAAGCAGTGGGAGCACGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATA < 1:3168849/70‑1CGTACAAGCAGTCGGAGCACGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATAT < 1:1044537/71‑1 GTACAAGCAGTGGGAGCACGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATT > 1:3605596/1‑71 GTACAAGCAGTGGGAGCACGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATT < 1:2082526/71‑1 TACAAGCAGTTGGAGCACGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATT < 1:1323809/70‑1 TACAAGCAGTGGGAGCACGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATT < 1:44622/70‑1 GTGGGAGCACGCTTAGGCGTGTGACTGCTTACCTTTTGTATAATGGGTCAGCGACTTATATTC < 1:1412921/63‑1 AGCACGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTC < 1:1759144/58‑1 TAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCGGTTAACCTTGCTACAGAATA > 1:2063747/1‑71 AGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATAT < 1:978542/47‑1 AGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATAT < 1:2020138/47‑1 AGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATAT < 1:1564188/47‑1 AGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATAT < 1:1521017/47‑1 GCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCGGTTAACCTTGCTACAGAATATAA < 1:1212179/71‑1 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATT < 1:1537455/42‑1 TGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATT < 1:1719898/41‑1 TGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATAT > 1:3608378/1‑40 ACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCGGTTAACCTTGCTACAGAATATAA > 1:484368/1‑64 ACTGCGTACCTTTTGTATAATGGGTCAGCGACTTAT > 1:2535579/1‑36 ACTGCGTACCTTTTGTATAATGGGTCAGCGACTTAT > 1:64692/1‑36 ACTGCGTACCTTTTGTATAATGGGTCAGCGACTTAT > 1:2130841/1‑36 ACTGCGTACCTTTTGTATAATGGGTCAGCGACTTAT > 1:2135341/1‑36 ACTGCGTACCTTTTGTATAATGGGTCAGCGACTTAT > 1:2463218/1‑36 CGTACCTTTTGTATAATGGGTCAGCGACTTATATT < 1:1434494/35‑1 CGTACCTTTTGTATAATGGGTCAGCGACTTATATT < 1:1391556/35‑1 CGTACCTTTTGTATAATGGGTCAGCGACTTATATT < 1:3446732/35‑1 cATATTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACC < 1:324042/40‑1 TATTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCT > 1:2880302/1‑70 TATTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACG < 1:539975/67‑1 TATTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACG < 1:2757563/67‑1 TATTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGT < 1:2220640/61‑1 TATTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGG < 1:799553/53‑1 TATTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAA < 1:533423/49‑1 ATTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCT > 1:1872754/1‑69 ATTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCC > 1:2974209/1‑68 ATTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTC < 1:2058246/61‑1 ATTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTA > 1:1263903/1‑54 ATTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACACATTATACAAAAGGTAAGCAGTCACACGCCT > 1:1033423/1‑69 TTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTAAG > 1:2750030/1‑71 TTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTAAG > 1:3494878/1‑71 TTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTAAG > 1:2361481/1‑71 TTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTA < 1:748681/69‑1 TTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTA < 1:3278576/69‑1 TTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTA < 1:2531913/69‑1 TTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTA < 1:753096/69‑1 TTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACG < 1:2785684/55‑1 TTCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACG < 1:2481225/55‑1 TTCGGTTAACCTTGCTACAGAATATAAGTCGCTGA > 1:1091463/1‑35 TCGGTTAACCTTGCTACAGAATATAAGTCGCTTACCCATTATACAAAAGGTACGCAGTCA < 1:1371602/60‑1 TCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCA < 1:2633056/60‑1 TCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGC < 1:286700/55‑1 TCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTAC > 1:1198531/1‑53 TCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTAC > 1:3520587/1‑53 TCGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTAC > 1:974893/1‑53 CGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTAAGC < 1:1157254/70‑1 CGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTAAGC < 1:716590/70‑1 CGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTAAGC < 1:2230323/70‑1 CGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTAAGC < 1:2299402/70‑1 CGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAG < 1:453307/56‑1 CGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAG < 1:1984576/56‑1 CGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACG > 1:2496039/1‑53 CGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACG > 1:2772058/1‑53 CGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCACTATACAAAAGGTACGCAGTCACACGCCTAAGC < 1:1278221/70‑1 CGTACAAGCAGTGGGAGCACGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/205106‑205178‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattcGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTAAGC < minE/205194‑205126 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |