New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? minE = 205864NA (NA)7 (0.130) 3/90 NT NA noncoding (1281/2904 nt) rrlH 23S ribosomal RNA
?minE = 205871 NA (NA)noncoding (1288/2904 nt) rrlH 23S ribosomal RNA

GCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/205789‑205864
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgggCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCA  <  minE/205871‑205802
                                                                                                                                                  
GCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAA                                                                             <  1:2947094/71‑1
GCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAA                                                                             <  1:248690/71‑1
GCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAA                                                                             <  1:2145431/71‑1
GCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAA                                                                             <  1:1672694/71‑1
 CCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAG                                                                            <  1:1152893/71‑1
  CTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC                                                                           <  1:2148325/71‑1
  CTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC                                                                           <  1:3403275/71‑1
  CTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC                                                                           <  1:798553/71‑1
  CTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC                                                                           <  1:3509704/71‑1
  CTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAG                                                                            <  1:2048885/70‑1
   TGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCG                                                                          >  1:2953390/1‑71
   TGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCG                                                                          >  1:550126/1‑71
   TGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCG                                                                          >  1:1184155/1‑71
   TGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCG                                                                          >  1:1124881/1‑71
   TGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGGGCGAATGCTGACATAAGTAACGATAAAGC                                                                           <  1:2444174/70‑1
    GCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGG                                                                         >  1:1443058/1‑71
    GCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGG                                                                         >  1:2994149/1‑71
     CGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGG                                                                        >  1:810325/1‑71
     CGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGG                                                                        >  1:814873/1‑71
     CGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGG                                                                         <  1:570659/70‑1
     CGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGG                                                                         <  1:302156/70‑1
     CGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCG                                                                          <  1:37169/69‑1
     CGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCG                                                                          <  1:2470850/69‑1
      GAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC                                                                           <  1:3721608/67‑1
         GGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGCgaa                                                                    <  1:3600416/71‑4
                 GTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCG                                                                          <  1:19477/57‑1
                 GTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCG                                                                          <  1:2754072/57‑1
                 GTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAG                                                                            <  1:2509913/55‑1
                  TGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC                                                                           <  1:615881/55‑1
                    AGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGCTTTTCACCCGCTTT                                                         <  1:705816/71‑1
                    AGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGCTTTTCACCCGCTTT                                                         <  1:2298665/71‑1
                    AGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGCTTTTCACCCGCTT                                                          <  1:1091783/70‑1
                      GCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGCTTTTCACCCGCT                                                           <  1:3399334/67‑1
                       CATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCCGGCTTTTCACCCGCT                                                           <  1:3678127/66‑1
                            TGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGG                                                                         >  1:2567894/1‑47
                            TGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC                                                                           <  1:3008251/45‑1
                            TGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC                                                                           <  1:2688720/45‑1
                            TGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC                                                                           <  1:3175168/45‑1
                                 GTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC                                                                           <  1:3182834/40‑1
                                   ATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGG                                                                         >  1:3494831/1‑40
                                   ATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGG                                                                         >  1:2164644/1‑40
                                   ATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGG                                                                         >  1:3103475/1‑40
                                   ATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGG                                                                         >  1:280523/1‑40
                                    TCAGAAGTGCGAATGCTGACATAAGTAACGATAAAG                                                                            <  1:3385014/36‑1
                                         AGTGCGAATGCTGACATAAGTAACGATAAAGCGGGCTTTTCACCCGCT                                                           <  1:3024738/48‑1
                                           TGCGAATGCTGTCATAAGTAACGATAAAGCGGGCTTTTCACCCGCTTT                                                         <  1:706633/48‑1
                                                                      AGCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAG                <  1:1706149/62‑1
                                                                      AGCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATA                       <  1:2124489/55‑1
                                                                       gaGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCAC      <  1:2024807/69‑1
                                                                       GCGGGCTTTTGACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTC                            <  1:3600943/49‑1
                                                                       GCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCAC      <  1:401470/71‑1
                                                                       GCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCA       >  1:3581887/1‑70
                                                                       GCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATACCTCAC      <  1:976561/71‑1
                                                                       GCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATACCTCAC      <  1:1165959/71‑1
                                                                         GGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAG    <  1:1687029/71‑1
                                                                         GGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCT                           <  1:3540873/48‑1
                                                                         GGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCT                           <  1:3020637/48‑1
                                                                         GGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCT                           <  1:2323977/48‑1
                                                                          GGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGC   <  1:2917245/71‑1
                                                                          GGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGC   <  1:1058621/71‑1
                                                                          GGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAG    >  1:785527/1‑70
                                                                          GGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAG    >  1:1053326/1‑70
                                                                          GGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACA     >  1:941249/1‑69
                                                                           GCTTTTCCCCCGCTTTATCGTTACTTAAGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCA  >  1:301848/1‑71
                                                                           GCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGGATGCCTCACAGCA  >  1:2138804/1‑71
                                                                           GCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCA  >  1:432693/1‑71
                                                                           GCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCA  >  1:2623104/1‑71
                                                                           GCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATA                       <  1:24194/50‑1
                                                                           GCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGA                         >  1:935459/1‑48
                                                                                                                                                  
GCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/205789‑205864
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgggCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCA  <  minE/205871‑205802

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.