| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 207550 | NA (NA) | 15 (0.290) | 10/90 | NT | NA | intergenic (+63/‑30) | rrlH/rrfH | 23S ribosomal RNA/5S ribosomal RNA |
| ? | minE | = 207562 | NA (NA) | intergenic (+75/‑18) | rrlH/rrfH | 23S ribosomal RNA/5S ribosomal RNA | |||||
GAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/207475‑207550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagaCCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGC < minE/207562‑207493 GAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAA > 1:2810967/1‑71GAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAA > 1:704077/1‑71 AGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAAT < 1:1294524/71‑1 AGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAAT < 1:1595409/71‑1 AGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAAT > 1:1700553/1‑71 AGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAA < 1:1910218/70‑1 GCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA < 1:1830768/71‑1 TTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAG > 1:342811/1‑70 TTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATC > 1:776580/1‑68 TAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAA < 1:3089922/65‑1 ACAACGCCGAAGGTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCT > 1:2899899/1‑71 CGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGT > 1:2561732/1‑71 GCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTT < 1:2453830/71‑1 CCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTC < 1:1822953/71‑1 CCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTC < 1:2830141/71‑1 CGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTT < 1:666296/70‑1 GAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTG < 1:1466608/71‑1 GAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTG < 1:2140035/71‑1 GTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCA < 1:2315050/47‑1 TTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGAT > 1:3217815/1‑66 TTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGAT > 1:616923/1‑66 TTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATC < 1:2947540/45‑1 TTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAAT < 1:402133/44‑1 TTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGA > 1:2121293/1‑47 TTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGA > 1:642332/1‑47 TTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGA > 1:2920195/1‑47 TGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAAT < 1:1569599/68‑1 GAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTG > 1:2206000/1‑51 GAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCT < 1:1945634/50‑1 AGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT < 1:2242244/53‑1 AGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCT > 1:3070773/1‑46 tcATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAt > 1:720271/3‑70 ATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAtc < 1:1952022/70‑3 TCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTT < 1:2787724/71‑1 TCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTT < 1:179948/71‑1 CAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTC > 1:3456920/1‑71 CAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAA > 1:831306/1‑63 AGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAA > 1:1324806/1‑63 AGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAT < 1:2629114/54‑1 AGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAT < 1:2006358/54‑1 GACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGG < 1:3531795/71‑1 GACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGG > 1:2630185/1‑71 GACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCG > 1:1127383/1‑70 ACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGGTGAAAATCTTCTCTCA > 1:1245239/1‑51 ACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGac > 1:1085974/1‑69 ACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGC < 1:399345/71‑1 ACCGCTTCTGCCTTCTGATTTAATCTGTATCAGGCTGAAAAac > 1:2649761/1‑41 GAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/207475‑207550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagaCCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGC < minE/207562‑207493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |