| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 285049 | 44 (0.750) | 8 (0.150) | 3/92 | NT | 16.9% | intergenic (+149/‑97) | tig/clpP | peptidyl‑prolyl cis/trans isomerase/proteolytic subunit of ClpA‑ClpP and ClpX‑ClpP ATP‑dependent serine proteases |
| ? | minE | = 285060 | 39 (0.730) | intergenic (+160/‑86) | tig/clpP | peptidyl‑prolyl cis/trans isomerase/proteolytic subunit of ClpA‑ClpP and ClpX‑ClpP ATP‑dependent serine proteases | |||||
TTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/284977‑285049‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatggGTACGGCATCACCATATTTCAAGCATAACAATCTTTTGTTGTTACGCTAACACCGAAAGAGGCTTTTCG < minE/285060‑284992 TTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATA < 1:3156491/70‑1 GCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATAT < 1:2404893/69‑1 CGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATAT > 1:1187361/1‑56 CGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATAT > 1:1450124/1‑56 GCCTCTTTTGTTGTTACGCTAACACCGAAAGATTGTTATGCTTGAAATATGGGTACGGCATCACCATATTT < 1:1787785/71‑1 TTAGCGTAACAACAAAAGATTGTTATGCTTGTAATATGG < 1:2987589/39‑1 TTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGG < 1:1160794/39‑1 TTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGG < 1:1930227/39‑1 TTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGG < 1:3480811/39‑1 TAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGG < 1:3321886/38‑1 GCGTAACAACAAAAGATTGTTATGCTTGAAATATG > 1:1024610/1‑35 GCGTAACAACAAAAGATTGTTATGCTTGAAATATG > 1:2189587/1‑35 ACAAAAGATTGTTATGCTTGAAATATGGGTACGGCA < 1:434469/36‑1 ACAAAAGATTGTTATGCTTGAAATATGGGTACGGCA < 1:2068065/36‑1 CAAAAGATTGTTATGCTTGAAATATGGGTACGGCA < 1:3030396/35‑1 AAAAGATTGTTATGCTTGAAATATGGGTACGGCATC > 1:74491/1‑36 AAAAGATTGTTATGCTTGAAATATGGGTACGGCATC > 1:3095243/1‑36 AAAAGATTGTTATGCTTGAAATATGGGTACGGCATC > 1:2409912/1‑36 AAAAGATTGTTATGCTTGAAATATGGGTACGGCATC > 1:2237612/1‑36 ATGGGTACGGCATCACCATATTTCAAGCATAACAATCTTTTGTTGTTACGCTAACACCGAAAGAGGCTTT < 1:2149091/70‑1 GGGTACGGCATCACCATATTTCAAGCATAACAATCTTTTGTTGTTACGCTAACACCGAAAGAGGCTTTTCG > 1:1650911/1‑71 GGGTACGGCATCACCATATTTCAAGCATAACAATCTTTTGTTGTT > 1:1568694/1‑45 TTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/284977‑285049‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatggGTACGGCATCACCATATTTCAAGCATAACAATCTTTTGTTGTTACGCTAACACCGAAAGAGGCTTTTCG < minE/285060‑284992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |