| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 481460 = | 80 (1.360) | 9 (0.170) | 3/90 | NT | 13.2% | coding (254/405 nt) | ybgC | predicted acyl‑CoA thioesterase |
| ? | minE | 481488 = | 48 (0.920) | coding (282/405 nt) | ybgC | predicted acyl‑CoA thioesterase | |||||
AACCTCTGCTTCATTCAGCAAAGTATTCTCGGCGTTGACAATACGTTGCGTGAAAACCAAAGAGGTGCCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/481533‑481460‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgcaACGTATTGTCAACGCCGAGAATACTTTGCTGAATGAAGCAGAGGTTCTGGTTGTTTGCGTTGACCCA > minE/481488‑481554 AACCTCTGCTTCATTCAGCAAAGTATTCTCGGCGTTGACAATACGTTGCGTGAAAACCAAAGAGGTGCCAC > 1:153734/1‑71 ACCTCTGCTTCATTCAGCAAAGTATTCTCGGCGTTGACAATACGTTGCGTGAAAACCAAAGAGGTGCCACG < 1:3235265/71‑1 CTCTGCTTCATTCAGCAAAGTATTCTCGGCGTTGACAATACGTTGCGTGAAAACCAAAGAGGTGCCACGCA > 1:3467077/1‑71 ACAATACGTTGCGTGAAAACCAAAGAGGTGCCACG > 1:1130771/1‑35 GCGTGAAAACCAAAGAGGTGCCACGCAACGTATTGTCAACGCCGAGAATACTTTGCTGAATGAAGCA < 1:121362/67‑1 GCGTGAAAACCAAAGAGGTGCCACGCAACGTATTGTCAACGCCGAGAATACTTTGCTGAATGAAGCA < 1:2067228/67‑1 GCGTGAAAACCAAAGAGGTGCCACGCAACGTATTGTCAACGCCGAGAATACTTTGCTGAATGAAGCA < 1:644870/67‑1 GTGAAAACCAAAGAGGTGCCACGCAACGTATTGTCAACGCCGAGAA < 1:1125735/46‑1 GTGAAAACCAAAGAGGTGCCACGCAACGTATTGTCAACGCCGAGAA < 1:2065237/46‑1 GTGAAAACCAAAGAGGTGCCACGCAACGTATTGTCAACGCCGAGAA < 1:2135198/46‑1 AAACCAAAGCGGTGCCACGCAACGTATTGTCAACGCCGAGAATACT > 1:3646500/1‑46 AAACCAAAGAGGTGCCACGCAACGTATTGTCAACGCCGAGAATACT > 1:3642122/1‑46 AGGTGCCACGCAACGTATTGTCAACGCCGAGAATACTTTGCTGAATGAAGCA < 1:3563081/52‑1 CGCAACGTATTGTCAACGCCGAGAATACTTTGCTGAATGAAGCAGAGGTTCTGGTTGTTTGCGTTGACCCA < 1:2729667/71‑1 GCAACGTATTGTCAACGCCGAGAATACTTTGCTGAATGAAGCAGAGGTTCTGGTTGTTTGCGTTGACCCA > 1:738075/1‑70 AACCTCTGCTTCATTCAGCAAAGTATTCTCGGCGTTGACAATACGTTGCGTGAAAACCAAAGAGGTGCCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/481533‑481460‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgcaACGTATTGTCAACGCCGAGAATACTTTGCTGAATGAAGCAGAGGTTCTGGTTGTTTGCGTTGACCCA > minE/481488‑481554 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |