| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 712998 = | 71 (1.200) | 7 (0.130) | 3/90 | NT | 10.2% | coding (438/1047 nt) | pyrC | dihydro‑orotase |
| ? | minE | 713021 = | 60 (1.150) | coding (415/1047 nt) | pyrC | dihydro‑orotase | |||||
GCAATCATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACACATGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/713072‑712998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgcaCCAGTAGCGGCATACCGATTTTTTCCATGCGCTCAAGTACCGGCATGATTGCGTCAATTGACGTCACGCC > minE/713021‑713090 GCAATCATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACACA < 1:1117198/71‑1GCAATCATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACACA > 1:3620304/1‑71GCAATCATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACAC < 1:3542546/70‑1 CAATCATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACACAT > 1:2601563/1‑71 CAATCATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACACAT < 1:2872368/71‑1 ATCATGCCGGTACTTGAGCGCATTGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACACATGC < 1:1684467/71‑1 ATCATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACACATGC < 1:3500325/71‑1 TCATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACACATG > 1:3304771/1‑69 ATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACAC > 1:1342955/1‑64 ATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACAC > 1:3555647/1‑64 ATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACAC > 1:3394678/1‑64 ATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACAC > 1:337661/1‑64 ATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACAC > 1:3640862/1‑64 ATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACAC > 1:1398977/1‑64 GTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACACATt > 1:1956463/1‑60 GTGCATGGTGATGTGACACATGCACCAGTAGCGGCATACCGATTTTTTCCATGCGCTC < 1:3144745/58‑1 TGCATGGTGAAGTGACACATGCACCAGTAGCGGCATACCGATTTTTTCCATGCGGTCAAGTACCGGCATGA > 1:1247355/1‑71 CATGGTGAAGTGACACATGCACCAGTAGCGGCATACCGATTTT < 1:274450/43‑1 CATGGTGAAGTGACACATGCACCAGTAGCGGCATACCGATTTT < 1:2594670/43‑1 CATGGTGAAGTGACACATGCACCAGTAGCGGCATACCGATTTT < 1:400472/43‑1 CATGGTGAAGTGACACATGCACCAGTAGCGGCATACCGATTTT < 1:3570966/43‑1 TGGTGAAGTGACACATGCACCAGTAGCGGCATACCGATTTT < 1:1131201/41‑1 CATGCACCAGTAGCGGCATACCGATTTTTTCCATGCGCTCAAGTACCGGCATGATTGCGTCAATTGACGT < 1:3640011/70‑1 TGCACCAGTAGCGGCATACCGATTTTTTCCATGCGCTCAAGTACCGGCATGATT > 1:1590693/1‑54 CACCAGTAGCGGCATACCGATTTTTTCCATGCGCTCAAGTACCGGCATGATTGCGTCAATTGACGTCACGC < 1:3638947/71‑1 ACCAGTAGCGGCATACCGATTTTTTCCATGCGCTCAAGTACCGGCATGATTGCGTCAATTGACGTCACGCC < 1:2870567/71‑1 ACCAGTAGCGGCATACCGATTTTTTCCATGCGCTCAAGTACCGGCATGATTGCGTCAATTGACGTCACGCC < 1:938076/71‑1 GCAATCATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACACATGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/713072‑712998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgcaCCAGTAGCGGCATACCGATTTTTTCCATGCGCTCAAGTACCGGCATGATTGCGTCAATTGACGTCACGCC > minE/713021‑713090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |