| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1037327 = | 87 (1.470) | 10 (0.190) | 5/92 | NT | 11.9% | coding (495/1059 nt) | rsxD | predicted inner membrane oxidoreductase |
| ? | minE | 1037353 = | 70 (1.320) | coding (521/1059 nt) | rsxD | predicted inner membrane oxidoreductase | |||||
CAGCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCACCACTGGCGGTATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1037399‑1037327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatgaACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCGCTGGATACATTTAAAACCTCTGTC > minE/1037353‑1037420 CAGCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCACCACTGGCGGTAT < 1:1727004/71‑1 AGCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCGCCAGTGGTGGTg < 1:746709/69‑2 AGCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCACCACTGGCGGTAT > 1:3124461/1‑70 AGCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGGGTTCATATCACCGCCAGTGGTGGTg < 1:3003235/69‑2 GCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCACCACTGGCGGTATGA > 1:1395836/1‑71 GCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCACCACTGGCGGTATGA > 1:2929380/1‑71 AAGCGTAGTGTGTTCATATCACCACCACTGGCGGTATGA < 1:3432937/39‑1 GTTCATATCACCACCACTGGCGGTATGAACACACTACTCTTAGGTATTGATTGCATTAGTCAG < 1:3656547/63‑1 GTTCATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAG < 1:1107560/63‑1 TCATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGC > 1:1224718/1‑63 TCATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTAT > 1:1221397/1‑45 CATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACAC < 1:285099/67‑1 CATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACAC < 1:1487678/67‑1 CATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACA > 1:276703/1‑66 CATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACA > 1:329806/1‑66 ATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACAC < 1:1037074/66‑1 TATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCG > 1:1760820/1‑67 TATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCGCTGGATACATTTAAAACCTCTG > 1:403328/1‑71 TGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCGCTGGATACATTTAAAACCTCTGTC < 1:2590526/71‑1 TGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCGCTGGATACATTTAAAACCTCTGTC < 1:2590161/71‑1 CAGCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCACCACTGGCGGTATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1037399‑1037327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatgaACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCGCTGGATACATTTAAAACCTCTGTC > minE/1037353‑1037420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |