| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1240246 | 40 (0.680) | 7 (0.140) | 4/88 | NT | 16.2% | intergenic (‑16/‑322) | zwf/yebK | glucose‑6‑phosphate dehydrogenase/predicted DNA‑binding transcriptional regulator |
| ? | minE | = 1240259 | 38 (0.750) | intergenic (‑29/‑309) | zwf/yebK | glucose‑6‑phosphate dehydrogenase/predicted DNA‑binding transcriptional regulator | |||||
TTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1240177‑1240246‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttaagtACCGGGTTAGTTAACTTAAGGAGAATGACATGGCGGTAACGCAAACAGCCCAGGCCTGTGACCTGGTCA < minE/1240259‑1240191 TTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGT > 1:1288693/1‑70TTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGT > 1:2891967/1‑70 TCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCT > 1:1004994/1‑63 CAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCT < 1:2972719/47‑1 CAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCT < 1:881875/47‑1 AGGTCACAGGCCTGGGCTGTTTGAGTTACCGCCATGTCATTCTCCTTAAGTACCGGGTTAGTTAACTTAAG < 1:3661192/71‑1 GCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTA < 1:3028747/39‑1 GCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTA < 1:3602538/39‑1 TTGCGTTACCGCCATGTCATTCTCCTTAAGTACCGGGTTAGTTAACTTAAG > 1:3125460/1‑51 GTTACCGCCATGTCATTCTCCTTAAGTACCGGGTTAG < 1:3238010/37‑1 TACCGCCATGTCATTCTCCTTAAGTACCGGGTTAGTT > 1:184119/1‑37 TACCGCCATGTCATTCTCCTTAAGTACCGGGTTAGTT > 1:188495/1‑37 TACCGCCATGTCATTCTCCTTAAGTACCGGGTTAGTT > 1:2365423/1‑37 TACCGCCATGTCATTCTCCTTAAGTACCGGGTTAGTT > 1:2936347/1‑37 CTTAAGTACCGGGTTAGTTAACTTAAGGAGAATGACATGGCGGTAACGCAAACAGCCCAGGCCTGTGACC > 1:179625/1‑70 TTAAGTACCGGGTTAGTTAACTTAAGGAGAATGACATGGCGGTA < 1:3351355/44‑1 AGTACCGGGTTAGTTAACTTAAGGAGAATGACATGGCGGTAACGCAAACAGCCCAGGCCTGTGACCTGGT < 1:1734378/70‑1 AGTACCGGGTTAGTTAACTTAAGGAGAATGACATGGCGGTAACGCAAACAGCCCAGGCCTGTGACCTGGT < 1:975564/70‑1 GTACCGGGTTAGTTAACTTAAGGAGAATGACATGGCGGTAACGCAAACAGCCCAGGCCTGTGACCTGGTCA < 1:3478961/71‑1 GTACCGGGTTAGTTAACTTAAGGAGAATGACATGGCGGTAACGCAAACAGCCCAGGCCTGTGACCTGGTCA < 1:1575622/71‑1 TTTCGCGCCGAAAATGACCAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1240177‑1240246‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttaagtACCGGGTTAGTTAACTTAAGGAGAATGACATGGCGGTAACGCAAACAGCCCAGGCCTGTGACCTGGTCA < minE/1240259‑1240191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |