| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1615730 = | 63 (1.070) | 4 (0.080) | 3/90 | NT | 7.0% | coding (50/1188 nt) | eutG | predicted alcohol dehydrogenase in ethanolamine utilization |
| ? | minE | 1615752 = | 50 (0.960) | coding (28/1188 nt) | eutG | predicted alcohol dehydrogenase in ethanolamine utilization | |||||
GGGCGAGAGAAAGCGGAGGGGCTATATGCAAAATGAATTGCAGACCGCGCTCTTTCAGGCGTTCGATACCCTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1615804‑1615730‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgaaAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCA > minE/1615752‑1615821 GGGCGAGAGAAAGCGGAGGGGCTATATGCAAAATGAATTGCAGACCGCGCTCTTTCAGGCGTTCGATACCC > 1:145694/1‑71 GGCGAGAGAAAGCGGAGGGGCTATATGCAAAATGAATTGCAGACCGCGCTCTTTCAGGCGTTCGATACCCT > 1:3478611/1‑71 GAGAGAAAGCGGAGGGGCTATATGCAAAATGAATTGCAGACCGCGCTCTTTCAGGCGTTCGATACCCTGAA < 1:526161/71‑1 GAGAGAAAGCGGAGGGGCTATATGCAAAATGAATTGCAGACCGCGCTCTTTCAGGCGTTCGATACCC > 1:1264231/1‑67 AGGGGCTATATGCAAAATGAATTGCAGACCGCGCTCTTTCAGGCGTTCGATACCCTG > 1:3191127/1‑57 GGGGCTATATGCAAAATGAATTGCAGACCGCGCTCTTTCAGGCGTTCGATACCCT > 1:1127323/1‑55 TCAGGCGTTCGATACCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCG > 1:1334214/1‑71 GCGTTCGATACCCTGAAAGAGCGCGGTCTGCAATTCAT < 1:3309205/38‑1 GCGTTCGATACCCTGAAAGAGCGCGGTCTGCAATTCAT < 1:907620/38‑1 GTTCGATACCCTGAAAGAGCGCGGTCTGCAATTCATTT > 1:2027736/1‑38 GAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTAC > 1:716091/1‑61 GAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTC > 1:1360922/1‑52 AAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCC < 1:933174/71‑1 AAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCA > 1:1315067/1‑56 AAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCA < 1:2872883/71‑1 AAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCA < 1:451203/71‑1 GGGCGAGAGAAAGCGGAGGGGCTATATGCAAAATGAATTGCAGACCGCGCTCTTTCAGGCGTTCGATACCCTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1615804‑1615730‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgaaAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCA > minE/1615752‑1615821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |