| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1660446 | 62 (1.050) | 8 (0.150) | 4/90 | NT | 12.8% | coding (1179/2244 nt) | yfgF | predicted inner membrane protein |
| ? | minE | = 1660457 | 54 (1.040) | coding (1168/2244 nt) | yfgF | predicted inner membrane protein | |||||
ATGCGCTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1660372‑1660446‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcacccTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAATACAGA < minE/1660457‑1660390 ATGCGCTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTT < 1:2141135/70‑1 TGCGCTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCA > 1:2185527/1‑71 TGCGCTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCA > 1:1909324/1‑71 GCGCTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTT < 1:3092763/68‑1 CGCTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACC > 1:2644588/1‑71 GCTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCC > 1:548027/1‑71 GCTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCC > 1:2850189/1‑71 GCTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCC > 1:2021970/1‑71 TTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCTTGCTGGAACCGGGTGAAG < 1:1192975/70‑1 TTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCTTGCTGGAACCGGGTGAAG < 1:270664/70‑1 TTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCTTGCTGGAACCGGGTGAAG < 1:1352040/70‑1 CAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCTTGCTGGAACCGGGTGAAGAT < 1:1635793/70‑1 TCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCC < 1:1059704/46‑1 TCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCC < 1:3107381/46‑1 GCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACC > 1:237827/1‑40 GCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACC > 1:2060684/1‑40 CCGAAAGCTGATAAACATCTTCACCCTTGCTGGAACCGGGT < 1:1541135/41‑1 GAAAGCTGATAAACATCTTCACCCTTGCTGGAACCGGGTG > 1:3100278/1‑40 GAAAGCTGATAAACATCTTCACCCTTGCTGGAACCGGGTG > 1:3176271/1‑40 GAAAGCTGATAAACATCTTCACCCTTGCTGGAACCGGGT > 1:3300961/1‑39 TCACCCTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAATA < 1:1381293/70‑1 TCACCCTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAATA < 1:1924182/70‑1 TCACCCTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAAT < 1:3289263/69‑1 CACCCTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAATA > 1:1234003/1‑69 CACCCTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGA > 1:2856746/1‑66 ACCCTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAATACAG < 1:407794/71‑1 ACCCTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAATA > 1:21261/1‑68 ACCCTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAATA > 1:376301/1‑68 CTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAATACAGA > 1:209411/1‑69 CTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAATACAGA > 1:1096036/1‑69 ATGCGCTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1660372‑1660446‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcacccTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAATACAGA < minE/1660457‑1660390 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |