New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? minE 1864946 =58 (0.980)3 (0.060) 3/92 NT 5.7% coding (316/861 nt) ygcQ predicted flavoprotein
?minE 1864972 = 47 (0.880)coding (290/861 nt) ygcQ predicted flavoprotein

GTGCAAGCATCTGCCAGGTGACTTCGTTAGATATTCCAACCGTAAGCGTGCGCAAATCCCACTGGGGAAATGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  minE/1865020‑1864946
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcACGCTTACGGTTGGAATATCTAACGAAGTCACCTGGCAGATGCTTGCACCATGTAAACGCCAGGCCAGCC  >  minE/1864972‑1865041
                                                                                                                                                 
GTGCAAGCATCTGCCAGGTGACTTCGTTAGATATTCCAACCGTAAGCGTGCGCAAATCCCACTGGGGAAAT                                                                            >  1:2185452/1‑71
GTGCAAGCATCTGCCAGGTGACTTCGTTAGATATTCCAACCGTAAGCGTGCGCAAATCCCACTGGGGAAAT                                                                            <  1:3535868/71‑1
 TGCAAGCATCTGCCAGGTGACTTCGTTAGATATTCCAACCGTAAGCGTGCGCAAATCCCACTGGGGAAATG                                                                           >  1:2232692/1‑71
  GCAAGCATCTGCCAGGTGACTTCGTTAGATATTCCAACCGTAAGCGTGCGCAAATCCCACTGGGGAAATGC                                                                          >  1:189351/1‑71
                                      ACCGTAAGCGTGCGCAAATCCCACTGGGGAAATGCGC                                                                        >  1:1124092/1‑37
                                                TGCGCAAATCCCACTGGGGAAATGCGCACGCTTACGGTTGGAATATCTAACGAAGTCACCTGGCAGAT                               <  1:1847341/68‑1
                                                  CGCAAATCCCACTGGGGAAATGCGCACGCTTACGGTTGGAATATCTAACGAAGTCACCTGGCAGATGC                             >  1:3321077/1‑68
                                                     AAATCCCACTGGGGAAATGCGCACGCTTACGGTTGGAATATCTAACGAAGTCACCTGGCAGATGCTTGCAC                       >  1:924463/1‑71
                                                                       GCGCACGCTTACGGTTGGAATATCTAACGAAGTCACCTGGCAGATGCTTGCACCATGTAAACGCCA          >  1:634280/1‑66
                                                                        CGCACGCTTACGGTTGGAATATCTAACGAAGTCACCTGGCAGATGCTTGCACCATGTAAACGCCAGGCCAG    >  1:3251046/1‑71
                                                                        CGCACGCTTACGGTTGGAATATCTAACGAAGTCACCTGGCAGATGCTTGCACCATGTAAACGCCAGGCCA     <  1:3083656/70‑1
                                                                         GCACGCTTACGGTTGGAATATCTAACGAAGTCACCTGGCAGATGCTTGCACCATGTAAACGCCAGGCCAGC   >  1:853434/1‑71
                                                                          CACGCTTACGGTTGGAATATCTAACGAAGTCACCTGGCAGATGCTTGCACCATGTAAACGCCAGGCCAGCC  >  1:1413595/1‑71
                                                                          CACGCTTACGGTTGGAATATCTAACGAAGTCACCTGGCAGATGCTTGCACCATGTAAACGCCAGGCCAGCC  >  1:1611580/1‑71
                                                                          CACGCTTACGGTTGGAATATCTAACGAAGTCACCTGGCAGATGCTTGCACCATGTAAACGCCAGGCCAGCC  >  1:290553/1‑71
                                                                                                                                                 
GTGCAAGCATCTGCCAGGTGACTTCGTTAGATATTCCAACCGTAAGCGTGCGCAAATCCCACTGGGGAAATGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  minE/1865020‑1864946
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcACGCTTACGGTTGGAATATCTAACGAAGTCACCTGGCAGATGCTTGCACCATGTAAACGCCAGGCCAGCC  >  minE/1864972‑1865041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.