| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1879048 | 63 (1.070) | 5 (0.090) | 3/94 | NT | 7.3% | coding (101/1638 nt) | pyrG | CTP synthetase |
| ? | minE | = 1879059 | 69 (1.270) | coding (90/1638 nt) | pyrG | CTP synthetase | |||||
CCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1878975‑1879048‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgaAGCCCGTGGCCTCAATGTGACCATCATGAAACTGGATCCGTACATCAACGTCGATCCAGGTACTATGAG < minE/1879059‑1878991 CCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACAT < 1:1213158/71‑1 CCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATT < 1:2038490/71‑1 CCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATT > 1:3644988/1‑71 CGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATTG < 1:3261721/71‑1 GGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACAT < 1:1582136/63‑1 GGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACAT < 1:3437983/63‑1 ATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATT < 1:3300510/62‑1 GTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGGCACATTGAAGCCCGTGGCCTCAATGT < 1:570882/70‑1 CTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATTGA < 1:1208044/48‑1 CTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATTGA < 1:604253/48‑1 CTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATTGA < 1:3013970/48‑1 GGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATT < 1:264490/44‑1 CGACGTTGATGTACGGTTCCAGTTTCATGATGGTCACAT < 1:1108916/39‑1 GACGTTGATGTACGGATCCAGTTTCATGATGGTCACATTGAAGCCCGTGGCCTCAAT > 1:875160/1‑57 TTGATGTACGGATCCAGTTTCATGATGGTCACATTGAAGCCCGTGGCCTCAA < 1:992008/52‑1 TTGATGTACGGATCCAGTTTCATGATGGTCACATTGAAGCCCGTGGCCTCAA < 1:55310/52‑1 TTGATGTACGGATCCAGTTTCATGATGGTCACATTGAAGCCCGTGGCCTCAA < 1:285729/52‑1 TTGAAGCCCGTGGCCTCAATGTGACCATCATGAAACTGGATCCGTACATCAACGTCGATCCAGGTACTAT > 1:277226/1‑70 GAAGCCCGTGGCCTCAATGTGCCCATCATGAAACTGGATCCGTACATCAACGTCGATCCAG > 1:2978028/1‑61 GAAGCCCGTGGCCTCAATGTGACCATCATGAAACTGGATCCGTACATCAACGTCGATCCAGGTACTATGAG > 1:2811109/1‑71 GAAGCCCGTGGCCTCAATGTGACCATCATGAAACTGGATCCGTACATCAACGTCGATCCAGGTACTATGAG > 1:522217/1‑71 GAAGCCCGTGGCCTCAATGTGACCATCATGAAACTGGATCCGTACATCAACGTCGATCCAGGTACTATGAG > 1:2189540/1‑71 GAAGCCCGTGGCCTCAATGTGACCATCATGAAACTGGATCCGTACATCAACGTCGATCCAGGTACTATGAG > 1:740502/1‑71 GAAGCCCGTGGCCTCAATGTGACCATCATGAAACTGGATCCGTACATCAACGTCGATCCAG > 1:2365578/1‑61 GAAGCCCGTGGCCTCAATGTGACCATCATGAAACTGGATCCGTACATCAACGTCGATCCAG > 1:1346578/1‑61 GAAGCCCGTGGCCTCAATGTGACCATCATGAAACTGGATCCGTACATCAACGTCGATCCAG > 1:103790/1‑61 CCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1878975‑1879048‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgaAGCCCGTGGCCTCAATGTGACCATCATGAAACTGGATCCGTACATCAACGTCGATCCAGGTACTATGAG < minE/1879059‑1878991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |