| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2001013 | 45 (0.760) | 8 (0.160) | 4/88 | NT | 16.0% | coding (270/1860 nt) | gss | fused glutathionylspermidine amidase and glutathionylspermidine synthetase |
| ? | minE | = 2001023 | 45 (0.880) | coding (260/1860 nt) | gss | fused glutathionylspermidine amidase and glutathionylspermidine synthetase | |||||
CCCGCGACCGGCGCACGCGGCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2000939‑2001013‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttctcgcTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTGCAGGCATTTCCTAACGGCTCGCCGC < minE/2001023‑2000955 CCCGCGACCGGCGCACGCGGCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTC < 1:1229368/71‑1CCCGCGACCGGCGCACGCGGCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTC > 1:200405/1‑71CCCGCGACCGGCGCACGCGGCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTC > 1:2540550/1‑71 CCGCGACCGGCGCACGCGGCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCT > 1:120740/1‑71 CCGCGACCGGCGCACGCGGCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCT > 1:2332669/1‑71 CGCGACCGGCGCACGCGGCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTC > 1:1139805/1‑71 CGACCGGCGCACGCGGCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGC < 1:2192033/71‑1 CGACCGGCGCACGCGGCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCG > 1:3531146/1‑70 GCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCTGCGCTTCCTGCGA < 1:293797/70‑1 GAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCTGCGCTTCCTGCGAGAA < 1:507104/71‑1 CCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCTGCGCTTCCTGC > 1:1206399/1‑50 CCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCTGCGCTTCCTGC > 1:2483014/1‑50 CCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCTGCGCTTCCTGC > 1:2373035/1‑50 CCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCTGCGCTTCCTGC > 1:1521244/1‑50 GGATGTTGTCATTAACCACTTCTCGCTGCGCTTCCTGCGAG > 1:222481/1‑41 GGATGTTGTCATTAACCACTTCTCGCTGCGCTTCCTGCGAG > 1:773432/1‑41 TTCTCGCTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTGCAGGCATTTCCTAACGGCT < 1:897478/70‑1 TCTCGCTGCGCTTCCTGCTAGAAGTGGTTAATGACAACATCCTGCCATTGCAGGCATTTCCTAACGGCTCG > 1:3448567/1‑71 TCTCGCTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTGCAGGCATTTCCTAACGGCTCG > 1:3118932/1‑71 TCTCGCTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTGCAGG > 1:643665/1‑54 TCGCTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTG > 1:1490247/1‑48 TCGCTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTG > 1:581787/1‑48 GCTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTGCAGGCATTTCCTAACGGCTCGCCGC < 1:2300480/71‑1 GCTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTGCAGGCATTTCCTAACGGCTCGCCGC < 1:2020756/71‑1 GCTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTGCAGGCATTTCCTAACGGCTCGCCGC < 1:617620/71‑1 GCTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTGCAGGCATTTCCTAACGGCTCGCC < 1:2569373/69‑1 CCCGCGACCGGCGCACGCGGCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2000939‑2001013‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttctcgcTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTGCAGGCATTTCCTAACGGCTCGCCGC < minE/2001023‑2000955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |