| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2074103 = | 78 (1.320) | 3 (0.060) | 3/90 | NT | 4.6% | coding (758/3093 nt) | ebgA | cryptic beta‑D‑galactosidase, alpha subunit |
| ? | minE | 2074134 = | 56 (1.080) | coding (789/3093 nt) | ebgA | cryptic beta‑D‑galactosidase, alpha subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAAAGCTGGCGCTGGTCAGTTTTTCAATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2074174‑2074103‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccatTGATCATTTGGCAATTGAAAAACTGACCAGCGCCAGCTTTGCTTTTACTGTCGAACAGCCGCAGCAATGG > minE/2074134‑2074203 CAAAGCTGGCGCTGGTCAGTTTTTCAATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCCA > 1:1783617/1‑71CAAAGCTGGCGCTGGTCAGTTTTTCAATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCCA > 1:2421788/1‑71 AAAGCTGGCGCTGGTCAGTTTTTCAATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCCAT < 1:3349196/71‑1 AAAGCTGGCGCTGGTCAGTTTTTCAATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCCTTCGCCAT < 1:3110029/71‑1 AAGCTGGCGCTGGTCAGTTTTTCAATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCCAT > 1:2199939/1‑70 AAGCTGGCGCTGGTCAGTTTTTCAATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCCAT > 1:2585660/1‑70 TTTCAATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCCA > 1:751145/1‑50 TTTCAATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCCA > 1:1945255/1‑50 AATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCC < 1:1063507/45‑1 AATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCC < 1:684450/45‑1 AATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCC < 1:251470/45‑1 AATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCC < 1:3249169/45‑1 ATCAATGGCGCTGCTGTGCACCACGCGTTCGCCATTGATCATTTGGCAATTGAAAAACTGACCAGCGCCA > 1:1522462/1‑70 AATGGCGCTGCTGTGCACCACCCGTTCGCCATTGATCATTTGGCAATTGAAAAACTGACCAGCGCCAGCTT > 1:2426861/1‑71 CTGTGCACCACGCGTTCGCCATTGATCATTTGGCAATTGAAAAACTGACCAGCGCCAGCTTTGCTTTTA < 1:1482252/69‑1 CGCCATTGATCATTTGGCAATTGAAAAACTGACCAGCGCCAGCT < 1:1181711/44‑1 CGCCATTGATCATTTGGCAATTGAAAAACTGACCAGCGCCAGCT < 1:2774333/44‑1 CGCCATTGATCATTTGGCAATTGAAAAACTGACCAGCGCCAGCT < 1:255146/44‑1 GCCATTGATCATTTGGCAATTGAAAAACTGACCAGCGCCAGCTTT > 1:210199/1‑45 ATTGATCATTTGGCAATTGAAAAACTGACCAGCGCCAGCTTTGCTTTTACTGTCGAACAGCCGCAGCAATG < 1:1639149/71‑1 TTGATCATTTGGCAATTGAAAAACTGACCAGCGCCAGCTTTGCTTTTACTGTCGAACAGCCGCAGCAATGG > 1:946825/1‑71 CAAAGCTGGCGCTGGTCAGTTTTTCAATTGCCAAATGATCAATGGCGCTGCTGTGCACCACGCGTTCGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2074174‑2074103‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccatTGATCATTTGGCAATTGAAAAACTGACCAGCGCCAGCTTTGCTTTTACTGTCGAACAGCCGCAGCAATGG > minE/2074134‑2074203 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |