| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2307169 = | 43 (0.730) | 10 (0.200) | 3/88 | NT | 20.6% | coding (2075/2199 nt) | priA | primosome factor n' |
| ? | minE | 2307203 = | 40 (0.790) | coding (2109/2199 nt) | priA | primosome factor n' | |||||
CGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2307242‑2307169‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaacaCATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGCTGGAT > minE/2307203‑2307272 CGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGC > 1:630524/1‑70 TATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAAC > 1:1968996/1‑70 TATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAAC > 1:2698693/1‑70 TGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAAC < 1:91509/67‑1 TGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAAC < 1:1886183/67‑1 TGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAAC < 1:2111250/67‑1 AGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCT < 1:2277992/52‑1 AGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCT < 1:2282333/52‑1 CGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCA < 1:2874158/53‑1 CAAGCGCACGCGGGAAGGGTGCTGCAACACATCATTAACGGTACGCTGGCGCTCATCAATAC < 1:1512279/62‑1 CAAGCGCACGCGGGAAGGGTGCTGCAACACATCATTAACGGTACGCTGGCGCTCATCAATAC < 1:2982419/62‑1 AGCGCACGCGGGAAGGGTGCTGCAACACATCATTAACGGTACGCTGGCGCTCATCAATACAA > 1:1494730/1‑62 CGCGGGAAGGGTGCTGCAACACATCATTAACGGTACGCTGGCGCTC > 1:988441/1‑46 CGCGGGAAGGGTGCTGCAACACATCATTAACGGTACGCTGGCGCTC > 1:3070986/1‑46 CGCGGGAAGGGTGCTGCAACACATCATTAACGGTACGCTGGCGCTC > 1:2979047/1‑46 CGCGGGAAGGGTGCTGCAACACATCATTAACGGTACGCTGGCGCTC > 1:2887388/1‑46 CGCGGGAAGGGTGCTGCAACACATCATTAACGGTACGCTGGCGCTC > 1:2132584/1‑46 CGCGGGAAGGGTGCTGCAACACATCATTAACGGTACGCTGGCGCTC > 1:1904009/1‑46 CGCGGGAAGGGTGCTGCAACACATCATTAACGGTACGCTGGCGCT > 1:415663/1‑45 TGCAACACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTG > 1:926464/1‑71 GCAACACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGC > 1:2833339/1‑71 GCAACACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGC > 1:3198905/1‑71 GCAACACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGT < 1:1404543/69‑1 ACACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGCTGG < 1:846547/71‑1 CACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTC < 1:2045146/47‑1 CACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTC < 1:1693602/47‑1 CACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTC < 1:1636726/47‑1 ACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGCTGGAT < 1:2899534/71‑1 CGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2307242‑2307169‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaacaCATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGCTGGAT > minE/2307203‑2307272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |