| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2406152 = | 45 (0.760) | 8 (0.160) | 4/88 | NT | 16.0% | coding (1309/2547 nt) | cyaA | adenylate cyclase |
| ? | minE | 2406177 = | 45 (0.880) | coding (1284/2547 nt) | cyaA | adenylate cyclase | |||||
CAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2406224‑2406152‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggtaaTGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCGGAGACGCTA > minE/2406177‑2406243 CAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGG > 1:636343/1‑70 AGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTA < 1:2249769/71‑1 AGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTA < 1:2081831/71‑1 GGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAA < 1:1017830/71‑1 ATTACCAGGTAAAGTGACGCTGGTAATGCTTCAAACGCGGCATACAGCTTACGC < 1:1043555/54‑1 CAGGTAAAGTGACGCTGGTAATGCTTCAAACTCGGCATACA < 1:2683955/41‑1 CAGGTAAAGTGACGCTGGTAATGCTTCAAACGCGGCATACA < 1:260419/41‑1 CAGGTAAAGTGACGCTGGTAATGCTTCAAACGCGGCATACA < 1:1861959/41‑1 CAGGTAAAGTGACGCTGGTAATGCTTCAAACGCGGCATACA < 1:1660701/41‑1 AGGTAAAGTGACGCTGGTAATGCTTCAAACGCGGCATACAGCTTAC > 1:1473600/1‑46 GGTAAAGTGACGCTGGTAATGCTTCAAACGCGGCATACAGC > 1:627290/1‑41 GGTAAAGTGACGCTGGTAATGCTTCAAACGCGGCATACAGC > 1:783877/1‑41 GTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCGGAGACGCTA < 1:2609900/71‑1 GTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCGGAGACGCTA < 1:1538273/71‑1 GTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCGGAGACGCTA < 1:3287615/71‑1 GTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCGGAGACGCT < 1:2820890/70‑1 GTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTG < 1:3178823/59‑1 CAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2406224‑2406152‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggtaaTGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCGGAGACGCTA > minE/2406177‑2406243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |