| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2432292 = | 88 (1.490) | 5 (0.090) | 3/94 | NT | 6.4% | coding (91/102 nt) | rhoL | rho operon leader peptide |
| ? | minE | 2432341 = | 64 (1.180) | coding (42/102 nt) | rhoL | rho operon leader peptide | |||||
TCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2432364‑2432292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacaAGACGGATTGAGTGACGAGCCAGAAATCTGTTCACTTCGCATTTAAGATAAAACGGGAAGCGTTGGAAAT > minE/2432341‑2432410 TCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGA > 1:107845/1‑71 GCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGACA < 1:3030836/69‑1 GCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGAC < 1:1056131/68‑1 GCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGAC < 1:2833323/68‑1 GCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGAC < 1:2445271/68‑1 CACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGACA < 1:1576038/63‑1 TCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGAC < 1:2950252/55‑1 TCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGACAAGACGGATTGAGTGACGAGCCAG > 1:1007516/1‑70 TCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGACAAGACGGATTGAGTGACGAGCCAG > 1:3509524/1‑70 CAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGACAAGACGGATTGAGTGACGAGCCAGAAATCT < 1:3452595/70‑1 TTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGACAAGACGGATTGAGTGACGAGC < 1:1891375/58‑1 CGTACTCTCCTGTGACCAGGCAGCGAAAAGACAAGACGGATTGAGTGACGAGC < 1:1107485/53‑1 ACAAGACGGATTGAGTGACGAGCCAGAAATCTGTTCACTTCGCATTTAAGATAAAACGGGAAGCGTTGGAA < 1:3194400/71‑1 CAAGACGGATTGAGTGACGAGCCAGAAATCTGTTCACTTCGCATTTAAGATAAAACGGGAAGCGTT > 1:2538751/1‑66 AAGACGGATTGAGTGACGAGCCAGAAATCTGTTCACTTCGCATTTAAGATAAAACGGGAAGCGTTGGAAAT < 1:2075337/71‑1 AAGACGGATTGAGTGACGAGCCAGAAATCTGTTCACTTCGCATTTAAGATAAAACGGGAAGCGTTGGAAAT < 1:2409706/71‑1 AAGACGGATTGAGTGACGAGCCAGAAATCTGTTCACTTCGCATTTAAGATAAAACGGGAAGCGTTGGAAAT < 1:3564818/71‑1 TCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2432364‑2432292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacaAGACGGATTGAGTGACGAGCCAGAAATCTGTTCACTTCGCATTTAAGATAAAACGGGAAGCGTTGGAAAT > minE/2432341‑2432410 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |