| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2676216 = | 72 (1.220) | 4 (0.070) | 3/100 | NT | 5.0% | intergenic (‑2/‑36) | gntX/bioH | gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system/carboxylesterase of pimeloyl‑CoA synthesis |
| ? | minE | 2676259 = | 81 (1.400) | coding (8/771 nt) | bioH | carboxylesterase of pimeloyl‑CoA synthesis | |||||
ATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2676262‑2676216‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aACATCTGGTGGCAGACCAAAGGTCAGGGGAATGTTCATCTTGTGCTGCTGCACGGATGGGGACTGAATGC > minE/2676259‑2676328 ATGTTATTCATCCGCAATTGTTCTCTTTTGACTTACAAGGATGAACAACATCTGGTGGCAGACCAAAGGT > 1:1368329/1‑70ATGTTATTCATCCGCAATTGTTCTCTTTTGACTTACAAGGATGAACAACATCTGGTGGCAGACCAAAGGT > 1:2085353/1‑70 CCGCTATTGTTCTCTTTTGACTTACAAGGATGAACAACATCTGGTGGCAGACCAAAGGTCAGGGGAATGTT > 1:2345598/1‑71 TCTCTTTTGACTTACAAGGATGAACAACATCTGGTGGCAGACCAAAGGTCAGGGGAATGTTCATCTTGTGC > 1:932117/1‑71 AACATCTGGTGGCAGACCAAAGGTCAGGGGAATGTTCATCTTGTGCTGCTGCACGGATGGGGACTGAATGC > 1:806744/1‑71 ATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2676262‑2676216‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aACATCTGGTGGCAGACCAAAGGTCAGGGGAATGTTCATCTTGTGCTGCTGCACGGATGGGGACTGAATGC > minE/2676259‑2676328 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |