| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2814840 = | 43 (0.730) | 4 (0.080) | 3/92 | NT | 10.3% | coding (496/1587 nt) | yjcC | predicted signal transduction protein |
| ? | minE | 2814859 = | 31 (0.580) | coding (515/1587 nt) | yjcC | predicted signal transduction protein | |||||
CTCTTTGCTTAACGAGAAAAAGGTTTTCGTCACCGTATCATACACACCCCATTGCAATGTCGGGTCATCAGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2814914‑2814840‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacatTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA > minE/2814859‑2814927 CTCTTTGCTTAACGAGAAAAAGGTTTTCGTCACCGTATCATACACACCCCATTGCAATGTCGGGTCATCAG < 1:76203/71‑1 TTTGCTTAACGAGAAAAAGGTTTTCGTCACCGTATCATACACACCCCATTGCAATGTCGGGTCATCAGA > 1:167445/1‑69 TGCTTAACGAGAAAAAGGTTTTCGTCACCGTATCATACACACCCCATTGCAATGTCGGGTCATCAGACAT > 1:232844/1‑70 AACGAGAAAAAGGTTTTCGTCACCGTATCATACACACCCCATTGCAATGTCGGGTCATCAGAC > 1:3710786/1‑63 TTTTCGTCACCGTATCATACACACCCCATTGCAATGTCGGGTCATCAGA > 1:61326/1‑49 TTTTCGTCACCGTATCATACACACCCCATTGCAATGTCGGGTCATCAGA > 1:48578/1‑49 TTTTCGTCACCGTATCATACACACCCCATTGCAATGTCGGGTCATCAGA > 1:3076015/1‑49 TTTCGTCACCGTATCATACACACCCCATTGCAATGTCGGGTCATCAGAC > 1:2773530/1‑49 CATACACACCCCATTGCAATGTCGGGTCATCAGAC < 1:1079986/35‑1 CATACACACCCCATTGCAATGTCGGGTCATCAGAC < 1:1857087/35‑1 CATACACACCCCATTGCAATGTCGGGTCATCAGAC < 1:2541244/35‑1 CATACACACCCCATTGCAATGTCGGGTCATCAGAC < 1:312123/35‑1 CATACACACCCAATTGCAATGTCGGGTCATCAGAC < 1:1008508/35‑1 TACACACCCCATTGCAATGTCGGGTCATCAGACAT > 1:3216317/1‑35 TACACACCCCATTGCAATGTCGGGTCATCAGACAT > 1:1786486/1‑35 TACACACCCCATTGCAATGTCGGGTCATCAGACAT > 1:556251/1‑35 TACACACCACATTGCAATGTCGGGTCATCAGACAT > 1:1662230/1‑35 AATGTCGGGTCATCAGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTC < 1:1260045/61‑1 ATGTCGGGTCATCAGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTT > 1:3307190/1‑57 TGTCGGGTCATCAGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTC > 1:2330321/1‑61 TGTCGGGTCATCAGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTC > 1:1704364/1‑61 GACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTT > 1:2854091/1‑51 GACATTGCAATGGGGTGTGTATGATACGGTGACGAA < 1:2880333/36‑1 GACATTGCAATGGGGTGTGTATGATACGGTGACGAA < 1:2573580/36‑1 ACATTGCAATGGGGTGTGTATGATACGGTGACGAA < 1:3017374/35‑1 ACATTGCAATGGGGTGTGTATGATACGGTGACGAA < 1:3257616/35‑1 ACATTGCAATGGGGTGTGTATGATACGGTGACGAA < 1:2180631/35‑1 ACATTGCAATGGGGTGTGTATGATACGGTGACGAA < 1:2865481/35‑1 CATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGC > 1:231197/1‑70 ATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA > 1:255201/1‑71 TTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA < 1:3282286/70‑1 CTCTTTGCTTAACGAGAAAAAGGTTTTCGTCACCGTATCATACACACCCCATTGCAATGTCGGGTCATCAGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2814914‑2814840‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacatTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA > minE/2814859‑2814927 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |