New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | = 2927666 | 63 (1.070) | 4 (0.070) | 3/102 | NT | 6.2% | coding (65/1101 nt) | yjgP | conserved inner membrane protein |
? | minE | = 2927692 | 58 (0.980) | coding (91/1101 nt) | yjgP | conserved inner membrane protein |
GGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2927622‑2927666 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTTTTGACAGAAGAAGATCAAAAGCAA < minE/2927692‑2927665 GGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTACTTTTGACAGAAGAAGATCAAAAG > 1:1732802/1‑70 GGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTACTTTTGACAGAAGAAGATCAAAAG > 1:62053/1‑70 GTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTACTTTTGACAGAAGAAGATCAAAAG < 1:2336540/69‑1 TGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTACTTTTGACAGAAGAAGATCAAAAGCAA < 1:3168977/71‑1 GGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2927622‑2927666 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTTTTGACAGAAGAAGATCAAAAGCAA < minE/2927692‑2927665 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |