New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | = 2942859 | 69 (1.170) | 7 (0.130) | 3/94 | NT | 7.9% | coding (1870/2325 nt) | fecA | ferric citrate outer membrane transporter |
? | minE | = 2942886 | 100 (1.840) | coding (1843/2325 nt) | fecA | ferric citrate outer membrane transporter |
GATGGAAACGTTATCAAGCGTTGGCGTTAGCGTACCCAGATCGTAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2942812‑2942859 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgCGCCATACCGGGCTGGAAACGCAGGCACGTTACGATCTGGGTACGCTAACGCCAACGCTTGATAACGTTT < minE/2942886‑2942817 GATGGAAACGTTATCAAGCGTTGGCGTTAGCGTACCCAGATCGTAACGCGCCATACCGGGCTGGAAA > 1:2227022/1‑67 ACGTTATCAAGCGTTGGCGTTAGCGTACCCAGATCGTAACGCGCCATACCGGGCTGGAAACGCAGGCACGT < 1:363847/71‑1 GCGTTGGCGTTAGCGTACCCAGATCGTAACGCGCCATACCGGGCTGGAAACGCAGG < 1:102619/56‑1 GCGTTGGCGTTAGCGTACCCAGATCGTAACGCGCCATACCGGGCTGGAAACGCAGG < 1:227473/56‑1 GCGTTGGCGTTAGCGTACCCAGATCGTAACGCGCCATACCGGGCTGGAAACGCAGG < 1:2444284/56‑1 GCGTTGGCGTTAGCGTACCCAGATCGTAACGCGCCATACCGGGCTGGAAACGCAGG < 1:269564/56‑1 GCGTTGGCGTTAGCGTACCCAGATCGTAACGCGCCATACCGGGCTGGAAACGCAGG < 1:700451/56‑1 ACGCGCCATACCGGGCTGGAAACGCAGGCACGTTACTATCTGGGTACGCTAACGCCAACGCT < 1:1131438/62‑1 ACGCGCCATACCGGGCTGGAAACGCAGGCACGTTACGATCTGGGTACGCTAACGCCAACGCTTGATAACGT < 1:2835092/71‑1 CGCGCCATACCGGGCTGGAAACGCAGGCACGTTACGATCTGGGTACGCTAACGCCAACGCTTGATAACGTT > 1:2696585/1‑71 GCGCCATACCGGGCTGGAAACGCAGGCACGTTACTATCTGGGTACGCTAACGCCAACGCTTGATAACGTTT < 1:3536912/71‑1 GCGCCATACCGGGCTGGAAACGCAGGCACGTTACGATCTGGGTACGCTAACGCCAACGCTTGATAACGTTT < 1:949821/71‑1 GCGCCATACCGGGCTGGAAACGCAGGCACGTTACGATCTGGGTACGCTAACGCCAACGCTTGATAACGTTT < 1:985082/71‑1 GATGGAAACGTTATCAAGCGTTGGCGTTAGCGTACCCAGATCGTAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2942812‑2942859 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgCGCCATACCGGGCTGGAAACGCAGGCACGTTACGATCTGGGTACGCTAACGCCAACGCTTGATAACGTTT < minE/2942886‑2942817 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |