| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 65954 = | 86 (1.460) | 4 (0.070) | 3/94 | NT | 5.7% | coding (745/1092 nt) | leuB | 3‑isopropylmalate dehydrogenase |
| ? | minE | 65986 = | 54 (0.990) | coding (713/1092 nt) | leuB | 3‑isopropylmalate dehydrogenase | |||||
Only 100 of 112 total aligned reads displayed.
AGGCTGGCGGAAGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCATGGTGGCGTTGTCGAT > minE/65884‑66023 | aGGCTGGCGGAAGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCaaa > 1:1257584/1‑71 (MQ=255)aGGCTGGCGGAAGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCaaa > 1:1088670/1‑71 (MQ=255) tGGCGGAAGGCAACATCCACATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAgg > 1:3446156/1‑71 (MQ=255) gCGGAAGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAgg < 1:198896/69‑1 (MQ=255) gCGGAAGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGtt < 1:3517157/71‑1 (MQ=255) gCGGAAGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGtt < 1:161378/71‑1 (MQ=255) ggAAGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTg < 1:1928707/70‑1 (MQ=255) gAAGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTg > 1:3518464/1‑69 (MQ=255) gAAGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTg > 1:741499/1‑69 (MQ=255) gAAGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTg > 1:501740/1‑69 (MQ=255) aaGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAg < 1:3709984/71‑1 (MQ=255) aaGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAg > 1:344159/1‑71 (MQ=255) aaGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAg > 1:635577/1‑71 (MQ=255) aaGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAg < 1:1199339/71‑1 (MQ=255) tcgaactggcgcatatgtacatcgacaacgccaccatgcagctgattaaagatccatca > 1:3363335‑M1/59‑59 (MQ=255) tcgaactggcgcatatgtacatcgacaacgccaccatgcagctgattaaagatccatca > 1:121331‑M1/59‑59 (MQ=255) tcgaactggcgcatatgtacatcgacaacgccaccatgcagctgattaaagatccatca > 1:116988‑M1/59‑59 (MQ=255) tcgaactggcgcatatgtacatcgacaacgccaccatgcagctgattaaagatccatca > 1:2091084‑M1/59‑59 (MQ=255) cgaactggcgcatatgtacatcgacaacgccaccatgcagctgattaaagatccatca > 1:1771548‑M1/58‑58 (MQ=255) cAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGca > 1:3075709/1‑69 (MQ=255) aCATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCAcagc < 1:1872082/71‑1 (MQ=255) cATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACTGGTTGGAGCAcag > 1:2317050/1‑69 (MQ=255) aTCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCAcagcag < 1:60257/71‑1 (MQ=255) aTCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCAcagcag < 1:959028/71‑1 (MQ=255) aTCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCAcagcag < 1:883615/71‑1 (MQ=255) aTCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCAcagcag < 1:86615/71‑1 (MQ=255) aTCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCAcagcag < 1:947187/71‑1 (MQ=255) tCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGa < 1:810367/71‑1 (MQ=255) cccATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGaa < 1:1235895/70‑1 (MQ=255) cccATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGaa < 1:3272024/70‑1 (MQ=255) cccATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGaa < 1:400106/70‑1 (MQ=255) cccATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAAc > 1:24392/1‑71 (MQ=255) cATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCTCCAAACAGGTTGGAGCACAGCAGAAc > 1:2507407/1‑69 (MQ=255) cATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAAc > 1:1907760/1‑69 (MQ=255) cATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAAc > 1:2237631/1‑69 (MQ=255) cATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACg > 1:2715477/1‑70 (MQ=255) cATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGACAAACAGGTTGGa > 1:3538070/1‑57 (MQ=255) cATCGAGCCAGTGATCATAGCGCACTAGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGaa > 1:2849370/1‑68 (MQ=255) aTCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAAc < 1:3007342/48‑1 (MQ=255) tCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAgg < 1:2896283/50‑1 (MQ=255) tCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCa < 1:3607700/71‑1 (MQ=255) tCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCa < 1:68732/71‑1 (MQ=255) tCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCa < 1:64247/71‑1 (MQ=255) gAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGtt > 1:2769916/1‑50 (MQ=255) gAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGtt > 1:3029762/1‑50 (MQ=255) aGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGa > 1:1966000/1‑52 (MQ=255) cAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACtgt < 1:2098387/71‑1 (MQ=255) cAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACtgt < 1:1611544/71‑1 (MQ=255) gTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGa > 1:321732/1‑71 (MQ=255) gTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGa > 1:589783/1‑71 (MQ=255) gATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAggat > 1:3476153/1‑40 (MQ=255) gATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTc > 1:338529/1‑60 (MQ=255) gATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTc > 1:3729267/1‑60 (MQ=255) gATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTc > 1:2946371/1‑60 (MQ=255) gATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTc > 1:847660/1‑60 (MQ=255) aTCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATgg < 1:730826/71‑1 (MQ=255) tCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAg > 1:3540321/1‑44 (MQ=255) gcgcACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACg > 1:1588593/1‑51 (MQ=255) ccaccatgcagctgattaaagatccatcACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCttt > 1:2484359‑M1/29‑71 (MQ=255) cgcACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCttt > 1:454925/1‑70 (MQ=255) cgcACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCttt > 1:3003766/1‑70 (MQ=255) cgcACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCttt > 1:459306/1‑70 (MQ=255) cgcACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCttt < 1:1524460/70‑1 (MQ=255) gcACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTaa < 1:1552617/71‑1 (MQ=255) gcACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTaa < 1:3069444/71‑1 (MQ=255) ccatgcagctgattaaagatccatcACAGGTTGGAGCGCAGCAGAACGTCAAACTGTGa < 1:2866047‑M1/34‑1 (MQ=255) tCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGt > 1:3123778/1‑46 (MQ=255) cGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACg < 1:1991131/44‑1 (MQ=255) cGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACg < 1:154403/44‑1 (MQ=255) cGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACg < 1:230493/44‑1 (MQ=255) gtaagacagaATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAg < 1:302220/66‑1 (MQ=255) gTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCa < 1:413357/46‑1 (MQ=255) cagacagaATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTg > 1:2356542/1‑70 (MQ=255) agacagaATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCa > 1:3157361/1‑71 (MQ=255) acagaATGTCGCCAAACAGGTTGGAGCACAGCAGa < 1:2050095/35‑1 (MQ=255) acagaATGTCGCCAAACAGGTTGGAGCACAGCAGa < 1:932157/35‑1 (MQ=255) acagaATGTCGCCAAACAGGTTGGAGCACAGCAGa < 1:2697203/35‑1 (MQ=255) cagaATGTCGCCAAACAGGTTGGATCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCAtgg < 1:3378109/71‑1 (MQ=255) cagaATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCAtgg < 1:94541/71‑1 (MQ=255) cagaATGTCGCAAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCAtgg < 1:2912544/71‑1 (MQ=255) ttaaagatccatcACAGGTTGGAGCACAGCAGAACGTCa > 1:3574173‑M1/14‑39 (MQ=255) agaATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCAtggt < 1:3324504/71‑1 (MQ=255) gaATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCAtggtg > 1:491634/1‑71 (MQ=255) gaATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCAtggtg > 1:2297955/1‑71 (MQ=255) gaATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCAtggtg > 1:2178700/1‑71 (MQ=255) tGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACtgt < 1:2886777/41‑1 (MQ=255) tGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACtgt < 1:856023/41‑1 (MQ=255) gTCGCCAATCAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCATGGTGGCGt > 1:1393722/1‑71 (MQ=255) gTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACtgt < 1:3398972/40‑1 (MQ=255) gTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACtgt < 1:2257805/40‑1 (MQ=255) gTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACtgt < 1:2562359/40‑1 (MQ=255) gTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACtgt < 1:3403163/40‑1 (MQ=255) gTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCATGGTGGCGt > 1:2661944/1‑71 (MQ=255) cGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGa > 1:3221954/1‑40 (MQ=255) gCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGa < 1:819431/39‑1 (MQ=255) gCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCATGGTGGCGTTg < 1:183975/70‑1 (MQ=255) gCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCATGGTGGCGTTGt > 1:3179579/1‑71 (MQ=255) ccAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCATGGTGGCGTTGTc > 1:1138620/1‑71 (MQ=255) ccAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCATGGTGGCGTTGTc > 1:1098529/1‑71 (MQ=255) cAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCATGGTGGCGTTGTCg < 1:1650998/71‑1 (MQ=255) | AGGCTGGCGGAAGGCAACATCCCCATCGAGCCAGTGATCATTGCGCACTCGTCAGACAGAATGTCGCCAAACAGGTTGGAGCACAGCAGAACGTCAAACTGTGATGGATCTTTAATCAGCTGCATGGTGGCGTTGTCGAT > minE/65884‑66023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |